Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6W3
Confidence3.68%DateThu Jan 5 11:04:03 GMT 2012
Rank44Aligned Residues8
% Identity50%Templatec2pjvA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:envelope glycoprotein; PDBTitle: solution structure of hiv-1 gp41 fusion domain bound to dpc2 micelle
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  GSLALGGA
Query Conservation 

  

  
Alig confidence 







Template Conservation 







Template Sequence  GALFLGFL
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 







   5....10..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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