 |
Job Description | P0A6W3 | Confidence | 2.88% | Date | Thu Jan 5 11:04:03 GMT 2012 |
Rank | 72 | Aligned Residues | 58 |
% Identity | 7% | Template | c2b2hA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:ammonium transporter; |
PDBTitle: ammonium transporter amt-1 from a. fulgidus (as)
|
Resolution | 1.54 Å |
|
 |
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | Y | S | G | F | N | V | F | S | Y | L | T | F | R | A | I | V | S | L | L | T | A | L | F | I | S | L | W | M | G | P | R | M | I | A | H | L | Q | K | L | S | F | G | Q | V | V | R | N | D | G | P | E | S | H | F | S | K | R | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   | . |
|   |   |   |
|
|   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |
|
|
|   |   |   |
|
|   |   |
Template Sequence |   |
L | F | G | N | P | Q | L | L | V | S | Q | L | I | A | V | A | S | T | T | A | Y | A | F | L | V | T | L | . |
I | L | A | K | A | V | D | A | A | V | G | L | R | V | S | S | Q | E | E | Y | V | G | L | D | L | S | Q | H | E | E | V |
Template Known Secondary structure |   |
G | G | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | T |
| S | B |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
331 | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | |
. | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|