Job Description P77475 Confidence 98.14% Date Thu Jan 5 12:29:43 GMT 2012 Rank 120 Aligned Residues 132 % Identity 15% Template d1ltqa1 SCOP info HAD-like HAD-like phosphatase domain of polynucleotide kinase Resolution 2.33

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	Y	A	G	L	I	F	D	M	D	G	T	I	L	D	T	E	P	T	H	R	K	A	W	R	E	V	L	G	H	Y	G	L	Q	Y	D	I	Q	A	M	I	A	L	N	G	S	P	T	W	R	I	A	Q	A	I	I	E	L	N	Q	A	D	L	D	P	H	A	L	A	R	E	K	T	E	A	V	R	S	M
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	P	K	A	V	I	F	D	V	D	G	T	L	A	K	X	N	G	R	G	P	Y	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K
Template Known Secondary structure		T	S								T	B	T	T	T	B			S	S			T	T		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																																																						.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.										.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.
Query Sequence		L	L	D	S	V	E	P	L	P	L	V	D	V	V	K	S	W	H	G	R	R	P	M	A	V	G	T	G	S	E	S	A	I	A	E	A	L	L	A	H	L	G	.	.	.	.	.	.	.	.	.	L	R	H	Y	F	D	A	V	V	A	A	D	H	V	K	H	H	K	P	A	P	D	T	F	L	L	C	A	Q
Query Conservation																																												.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	D	T	D	V	I	N	P	X	V	V	E	L	S	K	X	Y	A	L	X	G	Y	Q	I	V	V	V	S	G	R	E	S	G	T	K	E	D	P	T	K	Y	Y	R	X	T	R	K	W	V	E	D	I	A	G	V	P	L	V	X	Q	C	Q	R	E	Q	G	D	T	R	K	D	D	V	V	K	E	E	I	F	W
Template Known Secondary structure		G	G	G			B														T	T									S					S	S	S	T	T													T	T					S							T	T			S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		154	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		R	M	G	V	Q	P	T	Q	C	V	V	.	F	E	D	A	D	F	G	I	Q	A	A	R	A	A	G	M	D	A	V	D	V	R	L
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		K	H	I	A	P	H	F	D	V	K	L	A	I	D	D	R	T	Q	V	V	E	X	W	R	R	I	G	V	E	C	W	Q	V	A	S
Template Known Secondary structure				T	T	T	T																				T	T							S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions