Job Description P77475 Confidence 97.39% Date Thu Jan 5 12:29:43 GMT 2012 Rank 128 Aligned Residues 139 % Identity 15% Template c3bwvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative 5'(3')-deoxyribonucleotidase; PDBTitle: crystal structure of deoxyribonucleotidase-like protein (np_764060.1)2 from staphylococcus epidermidis atcc 12228 at 1.55 a resolution Resolution 1.55 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	I	F	D	M	D	G	T	I	L	D	T	E	P	T	H	R	K	A	W	R	E	V	L	G	H	Y	G	L	Q	Y	D	I	Q	A	M	I	A	L	N	G	S	P	T	W	R	I	A	Q	A	I	I	E	L	N	Q	A	D	L	D	P	H	A	L	A	R	E	K	T	E	A	V	R	S	M	L	L	D
Query Conservation
Alig confidence																										.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	I	A	I	D	X	D	E	V	L	A	D	T	L	G	A	V	V	K	A	V	N	E	.	.	.	R	A	D	L	N	I	K	X	E	S	L	N	G	K	K	L	G	L	V	X	D	I	L	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	F	F	R	N
Template Known Secondary structure									B	T	T	T	B													.	.	.		T	T					G	G	G	G	T	T	S											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	S
Template Predicted Secondary structure																										.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																							.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	E	P	L	P	L	V	D	V	V	K	S	W	H	G	R	R	P	M	A	V	G	T	G	S	E	S	A	I	A	E	A	L	L	A	H	L	G	L	R	H	Y	F	D	A	V	V	A	A	D	H	V	K	H	H	K	P	A	P	D	T	F	L	L	C	A	Q	R	M	G	V	Q	P	T	Q	C	V	V	F
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.							.	.	.	.
Template Sequence		L	D	V	X	P	H	A	Q	E	V	V	K	Q	L	N	E	H	Y	D	I	Y	I	A	T	A	A	X	D	V	P	T	S	F	H	D	K	Y	E	W	L	L	E	Y	F	P	F	L	D	P	Q	H	F	V	F	C	G	R	K	.	.	.	.	.	.	.	.	.	N	I	I	L	A	D	.	.	.	.	Y	L	I
Template Known Secondary structure				B		T	T									T	T	T	S								S	S	S	S	G	G	G													T	T	S		G	G	G					S	S	G	.	.	.	.	.	.	.	.	.	G	G				S	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.										.	.	.	.	.	130					.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	D	F	G	I	Q	A	A	R	A	A	G	M	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	N	P	K	Q	L	E	I	F	E	G	K	S	I	X	F
Template Known Secondary structure			S						T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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