Job Description P77475 Confidence 59.11% Date Thu Jan 5 12:29:43 GMT 2012 Rank 148 Aligned Residues 87 % Identity 7% Template c2b8eB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:cation-transporting atpase; PDBTitle: copa atp binding domain Resolution 2.30 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	P	L	P	L	V	D	V	V	K	S	W	H	G	R	R	P	M	A	V	G	T	G	S	E	S	A	I	A	E	A	L	L	A	H	L	G	L	R	H	Y	F	D	A	V	V	A	A	D	H	V	K	H	H	K	P	A	P	D	T	F	L	L	C	A	Q	R	M	G	V	Q	P	T	Q	C	V	V	F	E
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		T	L	K	E	S	A	K	P	A	V	Q	E	L	K	R	X	G	I	K	V	G	X	I	T	G	D	N	W	R	S	A	E	A	I	S	R	E	L	N	L	D	L	V	I	.	.	.	.	.	.	.	.	.	.	A	E	V	L	P	H	Q	K	S	E	E	V	K	K	L	Q	.	A	K	E	V	V	A	F	V	G
Template Known Secondary structure			B		T	T											T	T								S	S												T	T		S				.	.	.	.	.	.	.	.	.	.		S			T	T										T	.	T	T	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.											.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.		.	610	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	D	F	G	I	Q	A	A	R	A	A	G	M	D	A	V	D	V
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		D	G	I	N	D	A	P	A	L	A	Q	A	D	L	.	G	I	A	V
Template Known Secondary structure			S	S	T	T							S	S		.
Template Predicted Secondary structure																.
Template SS confidence
		618	.	620	.	.	.	.	.	.	.	.	.	630	.		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions