Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABX2
Confidence5.58%DateThu Jan 5 11:16:37 GMT 2012
Rank6Aligned Residues32
% Identity16%Templatec1z9eA_
PDB info PDB header:protein binding/transcriptionChain: A: PDB Molecule:pc4 and sfrs1 interacting protein 2; PDBTitle: solution structure of the hiv-1 integrase-binding domain in2 ledgf/p75
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130..
Predicted Secondary structure 
Query SS confidence 































Query Sequence  EMVNTMSASRSYQANVEVLNTVKSMMLKTLTL
Query Conservation 

  
    
 
 

         
    
 
Alig confidence 































Template Conservation 
 
 







  
  

 

  

 


  
Template Sequence  EMITTLKKIRRFKVSQVIMEKSTMLYNKFKNM
Template Known Secondary structure  TT
TT
SS
Template Predicted Secondary structure 

Template SS confidence 































   395....400.........410.........420......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions