 |
Job Description | P0ACS5 | Confidence | 40.29% | Date | Thu Jan 5 11:18:54 GMT 2012 |
Rank | 400 | Aligned Residues | 39 |
% Identity | 15% | Template | d2etha1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
Resolution | 2.30 |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
|
|
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | R | I | G | E | L | A | K | M | A | E | V | T | P | D | T | I | R | Y | Y | . |
. |
. |
. |
E | K | Q | Q | M | M | E | H | E | V | R | T | E | G | G | F | R | L | Y |
Query Conservation |   |
  |   |
|   |
|
|
|   |   |   |
|
|
|   |   |
|
|
|
|
| . | . | . | . |
|   |   |
|
|
|   |
|   |   |
|   |   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |
|   |
|   |   |   |
Template Sequence |   |
K | K | X | K | E | I | A | E | F | L | S | T | T | K | S | N | V | T | N | V | V | D | S | L | E | K | R | G | L | V | V | R | E | X | D | P | V | D | R | R | T | Y | R |
Template Known Secondary structure |   |
B |
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
| T | T | T | S | S |
|  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|