Job Description P0ACS5 Confidence 28.41% Date Thu Jan 5 11:18:54 GMT 2012 Rank 497 Aligned Residues 84 % Identity 10% Template d1s7oa_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like Resolution 2.31

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	I	R	H	A	R	Q	L	G	F	S	L	E	S	I	R	E	L	L	S	I	R	I	D	P	E	H	H	T	C	Q	E	S	K	G	I	V	Q	E	R	L	Q	E	V	E	A	R	I	A	E	L	Q	S	M	Q	R	S	L	Q	R	L	N	D	A	C	C	G	T	A	H	S	S	V	Y	C	S	I	L	E
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		N	Y	I	E	L	Y	Y	A	D	D	Y	S	L	A	E	I	A	D	E	F	G	V	S	R	Q	A	V	Y	D	N	I	K	R	T	E	K	I	L	E	T	Y	E	M	K	L	.	H	M	Y	S	D	Y	V	V	R	S	E	I	F	D	D	M	I	A	H	Y	P	H	D	E	Y	L	Q	E	K	I	S	I	L	T
Template Known Secondary structure										T												T																									.																					T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		129	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	D	N	R
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions