Job Description P0ACS5 Confidence 37.00% Date Thu Jan 5 11:18:54 GMT 2012 Rank 434 Aligned Residues 86 % Identity 15% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		3	.	.	.	.	.	.	10	.					.	.	.	.	.	.					.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure											.	.	.	.							.	.	.	.																										.	.	.	.
Query SS confidence											.	.	.	.							.	.	.	.																										.	.	.	.
Query Sequence		R	I	G	E	L	A	K	M	A	.	.	.	.	E	V	T	P	D	T	.	.	.	.	I	R	Y	Y	E	K	Q	Q	M	M	E	H	E	V	R	T	E	G	G	F	R	L	Y	T	E	.	.	.	.	S	D	L	Q	R	L	K	F	I	R	H	A	R	Q	L	G	F	S	L	E	S	I	R	E	L	L	S	I
Query Conservation											.	.	.	.							.	.	.	.																										.	.	.	.
Alig confidence											.	.	.	.							.	.	.	.											.															.	.	.	.
Template Conservation																																			.
Template Sequence		S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	.	D	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	S	K	N	F	I	N	K	V	Y	K	G	G	F	N	S	L	V	L	N	F	V	E
Template Known Secondary structure																																T	S		.						T	T							S	S																		S	T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	D	P	E	H	H	T	C	Q	E	S	K	G	I	V	Q	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	D	L	S	Q	D	E	I	E	E	L	R	N	I	L	N	K	K
Template Known Secondary structure			S															T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions