Job Description P0ACS5 Confidence 30.19% Date Thu Jan 5 11:18:54 GMT 2012
Rank 483 Aligned Residues 74
% Identity 9% Template c3lsgD_
PDB info
PDB header: transcription regulatorChain: D: PDB Molecule: two-component response regulator yesn;
PDBTitle: the crystal structure of the c-terminal domain of the two-2 component response regulator yesn from fusobacterium3 nucleatum subsp. nucleatum atcc 25586
Resolution 2.05 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
Y R I G E L A K M A E V T P D T I R Y Y E K Q Q M M E H E V R T E G G F R L Y T E S D L Q R L K F I R H A R Q L G F S L E S I R E L L S I R I D P E H H T C Q E
Query Conservation  
                                                                                                   
Alig confidence  
. . . . . . . . . . . . . .
Template Conservation  
                                        . . . . . . .       .                                         . . . . . .          
Template Sequence  
F T L S V L S E K L D L S S G Y L S I X F K K N F G I P F .
.
.
.
.
.
.
Q D Y .
L L Q K R X E K A K L L L L T T E L K N Y E I A E Q .
.
.
.
.
.
V G F E D V N Y
Template Known Secondary structure  
T S S . . . . . . . . . . . . . . T T S
Template Predicted Secondary structure  
. . . . . . . . . . . . . .
Template SS confidence  
   
170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . .
. 200 .
. . . . . . . . 210 . . . . . . . . . 220 . . . . . . .
. . 230 . . . . .
 
   
82 . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
S K G I V Q E R
Query Conservation  
             
Alig confidence  
Template Conservation  
       
Template Sequence  
F I T K F K K Y
Template Known Secondary structure  
Template Predicted Secondary structure  
Template SS confidence  
   
236 . . . 240 . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]