Job Description P0ACS5 Confidence 54.27% Date Thu Jan 5 11:18:54 GMT 2012 Rank 320 Aligned Residues 68 % Identity 24% Template c3ic7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator of gntr family2 from bacteroides thetaiotaomicron Resolution 2.82 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.												50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Y	R	I	G	E	L	A	K	M	A	E	V	T	P	D	T	I	R	Y	Y	.	.	.	.	E	K	Q	Q	M	M	E	H	E	V	R	T	E	G	G	F	R	L	Y	T	E	S	D	L	Q	R	L	K	.	.	.	.	.	.	.	.	.	.	.	F	I	R	H	A	R	Q	L	G	F	S	L	E	S	I	R
Query Conservation																							.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.												.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		I	P	S	V	R	E	Y	A	S	.	I	V	V	N	A	N	T	V	X	R	S	Y	E	Y	L	Q	S	Q	E	V	I	Y	N	K	R	G	I	G	F	F	V	A	S	G	A	K	X	L	I	H	S	L	R	K	E	Q	F	L	K	E	E	V	G	S	F	F	R	Q	L	Y	T	L	G	I	S	I	K	E	I	E
Template Known Secondary structure					T	T	T	T	T	T	.					S	G	G	G									T	T	T	S					T	T	T						T	T											T	T						S										T	T
Template Predicted Secondary structure											.
Template SS confidence
		32	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		66	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	X	Y	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions