Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACS5
Confidence99.92%DateThu Jan 5 11:18:54 GMT 2012
Rank4Aligned Residues127
% Identity24%Templatec3hh0C_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:transcriptional regulator, merr family; PDBTitle: crystal strucure of a transcriptional regulator, merr family2 from bacillus cereus
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  YRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQE
Query Conservation    
 


   


  





  


 
  
    

 
    
  
  
  

  
  
  
   
             
Alig confidence 



































































....







Template Conservation 


 
 
   


  





  


    
   


 
    
  
  
  

  
 

 


  
 ....        
Template Sequence  WLISEFASVGDVTVRALRYYDKINLLKPSDYTEGGHRLYTKDDLYVLQQIQSFKHLGFSLGEIQNIIL. . . . QRDIETEV
Template Known Secondary structure  TT

TTSS

S
TTS

TTT

....SS

Template Predicted Secondary structure 

























....




Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70 ........
 
   82.......90.........100.........110.........120.........130....
Predicted Secondary structure 











Query SS confidence 




















































Query Sequence  SKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHSSVYCSILEALEQGA
Query Conservation      
      
   
  
      
                  

  
    
Alig confidence 






































..











Template Conservation             
      
                    ..       
    
Template Sequence  FLRQXHFQREVLLAEQERIAKVLSHXDEXTKKFQKEERV. . NVALFSSFLQTF
Template Known Secondary structure  TT
SS
..
T
Template Predicted Secondary structure 



..
Template SS confidence 




















































   7980.........90.........100.........110....... ..120.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions