Job Description P0ACS5 Confidence 35.30% Date Thu Jan 5 11:18:54 GMT 2012 Rank 451 Aligned Residues 62 % Identity 13% Template c2it0A_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.										.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	I	G	E	L	A	K	M	A	E	V	T	P	D	T	I	R	Y	Y	.	.	.	.	E	K	Q	Q	M	M	E	H	E	V	R	T	E	G	G	F	R	L	Y	T	E	S	D	L	Q	R	L	K	F	I	R	H	A	.	.	.	.	.	.	.	.	.	R	Q	L	G	F	S	L	E	S	I	R	E
Query Conservation																						.	.	.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.							.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.
Template Sequence		P	L	R	A	R	I	A	E	R	L	D	Q	S	G	P	T	V	S	Q	T	V	S	R	M	E	R	D	G	L	L	.	.	.	R	V	A	G	D	R	H	L	E	L	T	E	K	G	R	A	L	A	I	A	V	M	R	K	H	R	L	A	E	R	L	L	V	D	V	I	G	L	P	W	E	E	V	H	A
Template Known Secondary structure											T	T																T	T	S		.	.	.				T	T																														T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions