 |
Job Description | P77561 | Confidence | 99.88% | Date | Thu Jan 5 12:30:35 GMT 2012 |
Rank | 35 | Aligned Residues | 129 |
% Identity | 12% | Template | d1tmoa1 |
SCOP info | Double psi beta-barrel
| ADC-like
| Formate dehydrogenase/DMSO reductase, C-terminal domain
|
Resolution | 2.50 |
|
 |
  |   |
630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | |
. | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
| . |
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | E | D | P | S | S | A | F | N | S | K | L | V | M | A | T | V | R | S | H | D | Q | Y | N | T | T | I | Y | G | M | D | . |
D | R | Y | R | G | V | F | G | Q | R | D | V | V | F | M | S | A | K | Q | A | K | I | C | R | V | K | N | G | E | R | V | N | L | I | A | L | T | P | D | G | K | R | S | S | R | R | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |   |
|
|   |
|
|
|   |
|   |
|   |
|   |   |
|   |
|   |   |   |
|   |   |   |
Template Sequence |   |
R | S | H | G | G | P | G | S | D | K | H | P | I | W | L | Q | S | C | H | P | D | K | R | L | H | S | Q | M | C | E | S | R | E | Y | R | E | T | Y | A | V | N | G | R | E | P | V | Y | I | S | P | V | D | A | K | A | R | G | I | K | D | G | D | I | V | R | V | F | N | D | R | G | Q | L | L | A | G | A | V | V | S |
Template Known Secondary structure |   |
| S | S | S | S | T | T | T | T | T |
|
|  |  |  |  |
|
|
|
| S | S | S | B | T | T | B | T | T | T |
|  |  |  |  | T | T | T |
| B | T | T | B |
|  |  |  |  |
|  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
633 | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . |
  |
  |   |
709 | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | L | K | V | V | I | Y | P | M | A | D | R | S | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | T | Y | F | P | E | S | N | H | M | L | T | L | D | N | H | D | P | L | S | G | I | P | G | Y | K | S | I | P | V | E | L | E | P | S |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |
|   |   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
Template Sequence |   |
D | N | F | P | K | G | I | V | R | I | H | E | G | A | W | Y | G | P | V | G | K | D | G | S | T | E | G | G | A | E | V | G | A | L | C | S | Y | G | D | P | N | T | L | T | L | D | I | G | T | S | K | L | A | Q | A | C | S | A | Y | T | C | L | V | E | F | E | K | Y |
Template Known Secondary structure |   |
T | T | S |
| T | T |  |  |  |
|
| T | T |
|
|
|
|  |  |
| T | T | S |
| S | G | G | G | G | S | T | T |
|  |  | S | S |
|
| G | G | G | S |
|
|
|
| B | S |
| T | T | T |
|
| B |
| T | T |
|
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
713 | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|