Job Description P77561 Confidence 100.00% Date Thu Jan 5 12:30:35 GMT 2012 Rank 21 Aligned Residues 543 % Identity 20% Template d1dmra2 SCOP info Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Resolution 1.82

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																							.																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	P	G	C	A	W	P	D	P	K	H	S	A	S	F	D	I	C	E	N	G	.	A	K	A	I	A	W	E	V	T	D	K	Q	V	N	A	S	F	F	A	E	N	T	V	Q	S	L	L	T	W	G	D	H	E	L	E	A	A	G	R	L	T	Q	P	L	K	Y	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.					.																							.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		T	V	M	S	G	.	.	.	.	.	.	.	.	.	.	.	.	S	H	W	G	V	F	T	A	T	V	E	N	G	R	A	T	A	F	T	P	W	E	K	D	P	H	P	.	S	P	M	L	A	G	V	L	D	S	I	Y	S	P	T	R	I	K	Y	P	M	V	R	R	E	F	L	E	K	G	V	N	A	D	R
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.		T	T									T	T									T	T		S	S		.		T	T										S	T	T	B			S											G	G	G	S		G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
		7	.	.	10	.													.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
			116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure		.																											.	.	.																		.	.	.	.
Query SS confidence		.																											.	.	.																		.	.	.	.
Query Sequence		.	D	A	V	S	D	C	Y	K	P	L	S	W	Q	Q	A	F	D	E	I	G	A	R	L	Q	S	Y	.	.	.	S	D	P	N	Q	V	E	F	Y	T	S	G	R	T	S	N	E	.	.	.	.	A	A	F	L	Y	Q	L	F	A	R	E	Y	G	S	N	N	F	P	D	C	S	N	M	C	H	E	P	T	S
Query Conservation		.																											.	.	.																		.	.	.	.
Alig confidence		.																											.	.	.																		.	.	.	.																			.
Template Conservation																																																																							.
Template Sequence		S	T	R	G	N	G	D	F	V	R	V	S	W	D	Q	A	L	D	L	V	A	A	E	V	K	R	V	E	E	T	Y	G	P	E	G	V	F	G	G	S	Y	G	W	K	S	P	G	R	L	H	N	C	T	T	L	L	R	R	M	L	T	L	A	G	G	Y	V	N	G	.	A	G	D	Y	S	T	G	A	A	Q
Template Known Secondary structure		G	G	T	T	S																												G	G	G													S	S															T			B			.		S		S	S	S	T	T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.
		188	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.									.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		V	G	L	A	A	S	I	G	V	.	.	.	.	G	K	G	T	V	L	L	E	D	F	E	K	C	D	L	V	I	C	I	G	H	N	P	G	T	N	H	P	.	.	.	.	.	.	.	.	R	M	L	T	S	L	R	A	L	V	K	R	G	A	K	M	I	A	I	N	P	L	Q	E	R	G	L	E	R	F	T
Query Conservation											.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																													.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		V	I	M	P	H	V	V	G	T	L	E	V	Y	E	Q	Q	T	A	W	P	V	L	A	E	N	T	E	V	M	V	F	W	A	A	D	P	I	K	T	S	Q	I	G	W	V	I	P	E	H	G	A	Y	P	G	L	E	A	L	K	A	K	G	T	K	V	I	V	I	D	P	V	R	T	.	.	.	.	.	.	.
Template Known Secondary structure								T	S	S			T	T	S			S										S						S							T	T			S	S	B				T												T								S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																	.																																																													.	.	.	.
Query SS confidence																	.																																																													.	.	.	.
Query Sequence		A	P	Q	N	P	F	E	M	L	T	N	S	E	T	Q	.	L	A	S	A	Y	Y	N	V	R	I	G	G	D	M	A	L	L	K	G	M	M	R	L	L	I	E	R	D	D	A	A	S	A	A	G	R	P	S	L	L	D	D	E	F	I	Q	T	H	T	V	G	F	D	E	L	R	R	D	V	L	.	.	.	.
Query Conservation																	.																																																													.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.					.																													.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	K	T	V	E	F	F	G	A	E	H	I	T	P	K	P	Q	T	D	V	A	I	M	L	G	M	A	H	T	L	V	A	E	D	.	.	.	.	.	.	.	.	.	.	L	Y	D	K	D	F	I	A	N	Y	T	S	G	F	D	K	F	L	P	Y	L	D	G	E	T	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.							T								T	T																T	T	.	.	.	.	.	.	.	.	.	.		S																				T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
													226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.											.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
				331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	N	S	E	W	K	D	I	E	R	I	S	G	L	S	Q	T	Q	I	A	E	L	A	D	A	Y	A	A	A	E	R	T	I	I	C	Y	G	M	G	I	T	Q	H	E	H	G	T	Q	N	V	Q	Q	L	V	N	L	L	L	M	K	G	N	I	G	K	P	G	A	G	I	C	P	L	R	G	H	S	N	V
Query Conservation		.	.
Alig confidence		.	.																											.
Template Conservation																														.
Template Sequence		S	T	P	K	T	A	E	W	A	E	G	I	S	G	V	P	A	E	T	I	K	E	L	A	R	L	F	E	.	S	K	R	T	M	L	A	A	G	W	S	M	Q	R	M	H	H	G	E	Q	A	H	W	M	L	V	T	L	A	S	M	L	G	Q	I	G	L	P	G	G	G	F	G	L	S	Y	H	Y	S	G	G
Template Known Secondary structure		S																												.		S								S	G	G	G	S	S	T	T	T															T		T	T	S	T	T					S		T	T	S	T	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.															.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	D	R	T	V	G	I	T	E	K	P	S	A	E	F	L	A	R	L	G	E	R	Y	G	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	H	A	P	G	H	A	A	I	A	S	M	Q	A	I	C	T	G	Q	A	R	A	L	I	C	M	G	G	N	F	A	L	A	M	P	D	R	E
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	P	S	T	S	G	P	A	L	A	G	I	T	D	G	G	A	A	T	K	G	P	E	W	L	A	A	S	G	A	S	V	I	P	V	A	R	V	V	D	M	L	E	N	P	G	A	E	F	D	F	N	G	T	R	S	K	F	P	D	V	K	M	A	Y	W	V	G	G	N	P	F	V	H	H	Q	D	R	N
Template Known Secondary structure		T	S				S										S	G	G	G	S							S	S	S			S				G	G	G							S	T	T						T	T															S							S	S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	A	V	P	L	T	Q	L	D	L	A	V	H	V	A	T	K	L	N	R	S	H	L	L	T	A	R	H	S	Y	I	L	P	V	L	G	R	S	E	I	D	M	Q	K	N	G	A	Q	A	V	T	V	E	D	S	M	S	M	I	H	A	S	R	G	V	L	K	P	A	G	V	M	L	K	S	E	C	A	V
Query Conservation
Alig confidence																												.	.	.																							.	.	.	.	.															.
Template Conservation																												.	.	.																							.	.	.	.	.															.
Template Sequence		R	M	V	K	A	W	E	K	L	E	T	F	V	V	H	D	F	Q	W	T	P	T	A	R	H	A	.	.	.	D	I	V	L	P	A	T	T	S	Y	E	R	N	D	I	E	T	I	G	D	Y	S	.	.	.	.	.	N	T	G	I	L	A	M	K	K	I	V	E	P	L	.	Y	E	A	R	S	D	Y	D	I
Template Known Secondary structure							G	G	G		S							S	B							T		.	.	.	S					B			G	G	G	S								T	T	T	.	.	.	.	.											S				.	T	T		B
Template Predicted Secondary structure																												.	.	.																							.	.	.	.	.															.
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.				470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.						.	.	.	.	.	.	.	.	500	.	.	.	.	.		.	.	.	.	510	.	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570						.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610															.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	G	I	A	Q	A	A	L	P	Q	S	V	V	A	W	.	.	.	.	.	E	Y	L	V	E	D	Y	D	R	I	R	N	D	I	E	A	V	L	P	E	F	A	D	Y	N	Q	R	I	R	H	P	G	G	F	H	L	I	N	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	R	R	W
Query Conservation																		.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																									.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		F	A	A	V	A	E	R	L	G	K	G	A	E	F	T	E	G	K	D	E	M	G	W	I	K	S	F	Y	D	D	A	A	K	Q	G	K	A	A	G	V	Q	M	P	A	F	.	D	A	F	W	A	E	G	I	V	E	F	P	V	T	D	G	A	D	F	V	R	Y	A	S	F	R	E	D	P	L	L	N	P	L
Template Known Secondary structure									T	T							T	T																					T	T							.														S	S	G	G	G			T	T							T	T	T	S
Template Predicted Secondary structure																																															.
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	P	S	G	K	A	N	F	I	T	S	K	G	L	L	E	D	P	S	S	A	F	N	S	K	L	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	P	T	G	L	I	E	I	Y	S	K	N	I	E	K	M	G	Y	D	D	C	P	A	H	P	T	W	M
Template Known Secondary structure		S	S	T	T	S	S			S	S								T		T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.