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Job DescriptionP77561
Confidence94.32%DateThu Jan 5 12:30:35 GMT 2012
Rank71Aligned Residues113
% Identity15%Templatec3shoA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.........190.........200.......
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Query Sequence  QQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFE
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Template Sequence  PEAIEAAVEAIRA. . . . DHVIVVGXGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLA. . . . . . . . . . . . . . . . NLR
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GGGTT




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   121........130... ......140.........150.........160.........170....... ..180
 
   208.210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  KCDLVICIGHNPGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVR
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Template Sequence  PTDLXIGVSVWR. . YLRDTVAALAGAAERGVPTXALTDSSV. . . . . . . . . . . . . . . . . SPPARIADHVLVAA
Template Known Secondary structure  TT

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   182.......190... ......200.........210.........220 .........230....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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