Job Description P77561 Confidence 95.89% Date Thu Jan 5 12:30:35 GMT 2012 Rank 54 Aligned Residues 186 % Identity 14% Template c3fkjA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerases; PDBTitle: crystal structure of a putative phosphosugar isomerase (stm_0572) from2 salmonella typhimurium lt2 at 2.12 a resolution Resolution 2.12 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	F	D	E	I	G	A	R	L	Q	S	Y	S	D	P	N	Q	V	E	F	Y	T	S	G	R	T	S	N	E	A	A	F	L	Y	Q	L	F	A	R	E	Y	G	S	N	N	F	P	D	C	S	N	M	C	H	E	P	T	S	V	G	L	A	A	S	I	G	V	G	K	G	T	V	L	L	E	D	F	E	K
Query Conservation
Alig confidence																																																	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	N	A	R	R	I	I	S	D	I	L	G	K	Q	N	I	E	R	V	W	F	V	G	C	G	G	S	L	T	G	F	W	P	G	K	Y	F	L	D	C	E	A	S	K	L	A	V	.	.	.	.	.	G	Y	I	T	S	N	E	F	V	.	.	.	.	.	.	.	.	.	.	.	H	A	T	P	K	A	L	G
Template Known Secondary structure													T	T	S										S	T					T	T												S	S				.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.		S			T	T		S
Template Predicted Secondary structure																																																	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.												.	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																					.	.																																									.	.	.
Query SS confidence																																					.	.																																									.	.	.
Query Sequence		C	D	L	V	I	C	I	G	H	N	P	G	T	N	H	P	R	M	L	T	S	L	R	A	L	V	K	R	G	A	K	M	I	A	I	.	.	N	P	L	Q	E	R	G	L	E	R	F	T	A	P	Q	N	P	F	E	M	L	T	N	S	E	T	Q	L	A	S	A	Y	Y	N	V	R	I	G	G	D	.	.	.
Query Conservation																																					.	.																																									.	.	.
Alig confidence																	.																				.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	S	V	V	I	L	A	S	Q	Q	G	N	T	A	.	E	T	V	A	A	A	R	V	A	R	E	K	G	A	A	T	I	G	L	V	Y	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	P	L	C	E	Y	S	D	Y	I	I	E	Y	Q	W	A	R	Y	P	E	T
Template Known Secondary structure		T	T								S	S	S				.													T								S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						T		S						B				T	T	S
Template Predicted Secondary structure																	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
									284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	M	A	L	L	K	G	M	M	R	L	L	I	E	R	D	D	A	A	S	A	A	G	R	P	S	L	L	D	D	E	F	I	Q	T	H	T	V	G	F	D	E	L	R	R	D	V	L	N	S	E	W	K	D	I	E	R	I	S	G	L	S	Q	T	Q	I	A	E	L	A	D	A	Y	A
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		V	D	P	A	Q	Q	K	A	A	Y	S	L	W	L	A	L	E	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	T	E	G	Y	A	Q	Y	D	E	L	V	S	A	F	.	G	R	F	S	D	V	V	H	G	A	Q	R	Q	V	Q	E	D	A	Q	R	F	A	A	E	W	K
Template Known Secondary structure				G	G	G	B														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T			T	T									.		T												T												T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		357	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	R	T	I	I	C	Y	G	M	G	I	T
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		D	E	K	V	V	Y	X	X	.	G	S	G	P	S
Template Known Secondary structure		T		S						.			G	G	G
Template Predicted Secondary structure										.
Template SS confidence
		191	.	.	.	.	.	.	.		.	200	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions