Job Description P77561 Confidence 95.96% Date Thu Jan 5 12:30:35 GMT 2012 Rank 53 Aligned Residues 195 % Identity 16% Template c3fj1A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerase; PDBTitle: crystal structure of putative phosphosugar isomerase (yp_167080.1)2 from silicibacter pomeroyi dss-3 at 1.75 a resolution Resolution 1.75 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		K	P	L	S	W	Q	Q	A	F	D	E	I	G	A	R	L	Q	S	Y	.	.	.	.	.	.	S	D	P	N	Q	V	E	F	Y	T	S	G	R	T	S	N	E	A	A	F	L	Y	Q	L	F	A	R	E	Y	G	S	N	N	F	P	D	C	S	N	M	C	H	E	P	T	S	V	G	L	A	A	S	I	G	V
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	E	A	V	Q	R	L	L	D	H	G	A	Q	D	V	A	R	V	A	A	V	L	R	L	R	D	P	S	F	V	A	T	V	A	R	G	S	S	D	H	V	C	T	Y	L	S	Y	A	A	E	L	L	L	G	L	P	V	A	S	L	G	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																														S								T																										T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	G	T	V	L	L	E	D	F	E	K	C	D	L	V	I	C	I	G	H	N	P	G	T	N	H	P	R	M	L	T	S	L	R	A	L	V	K	R	G	A	K	M	I	A	I	N	P	L	Q	E	R	G	L	E	R	F	T	A	P	Q	N	P	F	E	M	L	T	N	S	E	T	Q	L	A	S	A	Y	Y
Query Conservation
Alig confidence																									.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	S	V	Y	D	A	R	L	R	L	D	R	A	L	C	L	A	V	S	Q	S	G	.	.	K	S	P	D	I	V	A	X	T	R	N	A	G	R	D	G	A	L	C	V	A	L	T	N	D	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	L	A	G	V	S	A	H	T	I
Template Known Secondary structure					T	T							T	T								S	S	S	.	.															T	T								S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					T	S	S
Template Predicted Secondary structure																									.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																		.	130	.	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	R	I	G	G	D	M	A	L	L	K	G	M	M	R	L	L	I	E	R	D	D	A	A	S	A	A	G	R	P	S	L	L	D	D	E	F	I	Q	T	H	T	V	G	F	D	E	L	R	R	D	V	L	N	S	E	W	K	D	I	E	R	I	S	G	L	S	Q	T	Q	I	A	E	L	A	D	A	Y	A
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																									.														.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.																									.														.	.	.
Template Sequence		D	I	H	A	G	P	E	L	S	V	A	A	T	K	T	F	V	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	A	G	L	X	L	L	A	D	W	A	E	D	D	G	L	R	A	A	L	G	N	L	.	P	E	T	L	A	A	A	S	R	I	D	W	P	.	.	.	E	X	R	V	A	I	G
Template Known Secondary structure										S	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.													T										T		.									T					.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.																									.														.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.														.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	R	T	I	I	C	Y	G	M	G	I	T
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		A	R	P	S	L	F	T	L	.	G	R	G	T	S
Template Known Secondary structure			S							.			G	G	G
Template Predicted Secondary structure										.
Template SS confidence
		203	.	.	.	.	.	.	210		.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions