Job Description P77561 Confidence 96.05% Date Thu Jan 5 12:30:35 GMT 2012 Rank 52 Aligned Residues 152 % Identity 16% Template c3etnD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution Resolution 1.70 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	W	Q	Q	A	F	D	E	I	G	A	R	L	Q	S	Y	S	D	P	N	Q	V	E	F	Y	T	S	G	R	T	S	N	E	A	A	F	L	Y	Q	L	F	A	R	E	Y	G	S	N	N	F	P	D	C	S	N	M	C	H	E	P	T	S	V	G	L	A	A	S	I	G	V	G	K	G	T	V	L	L	E
Query Conservation
Alig confidence																			.	.																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	Y	E	K	A	V	E	L	I	V	E	Q	I	H	R	K	.	.	K	G	K	L	V	T	S	G	X	G	K	A	G	Q	I	A	X	N	I	A	T	T	F	C	S	.	T	G	I	P	S	V	F	L	H	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	Q	H	G	D	L	G
Template Known Secondary structure		T													T	T	T	T	.	.									S																	.	T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	T	G	G	G
Template Predicted Secondary structure																			.	.																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.																	.	.	.	.	80	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		D	F	E	K	C	D	L	V	I	C	I	G	H	N	P	G	T	N	H	P	R	M	L	T	S	L	R	A	L	V	K	R	G	A	K	M	I	A	I	N	P	L	Q	E	R	G	L	E	R	F	T	A	P	Q	N	P	F	E	M	L	T	N	S	E	T	Q	L	A	S	A	Y	Y	N	V	R	I	G	G	D	.
Query Conservation																																																																																	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	Q	E	N	D	L	L	L	L	I	S	N	S	G	K	T	R	E	I	V	E	L	T	Q	L	A	H	N	L	N	P	G	L	K	F	I	V	I	T	G	N	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	L	A	S	E	S	D	V	C	L	S	T	G	H	P	A	E	V
Template Known Secondary structure		G			T	T								S	S	S																	T	T								S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
																284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	L	L	K	G	M	M	R	L	L	I	E	R	D	D	A	A	S	A	A	G	R	P	S	L	L	D	D	E	F	I	Q	T	H	T	V	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.
Template Sequence		C	T	L	G	X	T	P	T	T	S	T	T	V	X	T	V	I	G	D	I	L	V	V	Q	T	X	K	R	T	.	.	.	.	.	.	.	.	.	E	F	T	I	E	E	Y	S	K	R	H	H	G	G
Template Known Secondary structure		S	T	T	S		S	S	S																						.	.	.	.	.	.	.	.	.	T								T	T	S		G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.										.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions