Job Description P77561 Confidence 96.96% Date Thu Jan 5 12:30:35 GMT 2012 Rank 43 Aligned Residues 146 % Identity 14% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	F	D	E	I	G	A	R	L	Q	S	Y	S	D	P	N	Q	V	E	F	Y	T	S	G	R	T	S	N	E	A	A	F	L	Y	Q	L	F	A	R	E	Y	G	S	N	N	F	P	D	C	S	N	M	C	H	E	P	T	S	V	G	L	A	A	S	I	G	V	G	K	G	T	V	L	L	E	D	F	E
Query Conservation
Alig confidence															.	.	.
Template Conservation															.	.	.
Template Sequence		S	R	A	A	M	T	L	V	Q	S	L	L	N	.	.	.	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R
Template Known Secondary structure														T	.	.	.	T								S	T															T		S	S	S										S	S										T	T	S	T	T	G	G	G	T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
						208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280
Predicted Secondary structure		.	.	.	.																																																																	.	.	.
Query SS confidence		.	.	.	.																																																																	.	.	.
Query Sequence		.	.	.	.	K	C	D	L	V	I	C	I	G	H	N	P	G	T	N	H	P	R	M	L	T	S	L	R	A	L	V	K	R	G	A	K	M	I	A	I	N	P	L	Q	E	R	G	L	E	R	F	T	A	P	Q	N	P	F	E	M	L	T	N	S	E	T	Q	L	.	.	.	A	S	A	Y	Y	N	V	R	I
Query Conservation		.	.	.	.																																																																	.	.	.
Alig confidence		.	.	.	.													.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.								.
Template Conservation																		.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	.	.	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	A	G	L	L	G	P	Q	D	V	E	I	R	I	.	P
Template Known Secondary structure						T	T								S	S	S	.	.															T	T									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T							.	S
Template Predicted Secondary structure																		.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.
		281	.	.	.	.					.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		G	G	D	M	A	.	.	.	.	L	L	K	G	M	M	R	L	L	I	E
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.
Template Conservation
Template Sequence		S	H	R	S	A	R	I	Q	E	M	H	M	L	T	V	N	C	L	C	D
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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