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Job DescriptionP77561
Confidence100.00%DateThu Jan 5 12:30:35 GMT 2012
Rank10Aligned Residues658
% Identity20%Templatec2vpyE_
PDB info PDB header:oxidoreductaseChain: E: PDB Molecule:thiosulfate reductase; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp)
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90. ........100.........110..... ....
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Query Sequence  FDCPGCAWPDPKHSASFDICENGAKAIAWEVTDKQVNASFFAENT. . . VQSLLTWGDHELEAAGRLTQPLKY. . . . DAVS
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Template Sequence  QICEGCFWRC. . . . . . . . . . . . GIVAHAVGNRVYKVEGYEANPKSRGRLCPRGQGAPQTTYDPDRLKRPLIRVEGSQRGE
Template Known Secondary structure 

SSTT

............SSS

TTSTTTTT


GGGGGG
TTS

S

TT

SSS
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   42.......50. ........60.........70.........80.........90.........100.........
 
   120.........130.........140. ........150.........160.........170.... .....180.........190.....
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Query Sequence  DCYKPLSWQQAFDEIGARLQSY. . . SDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNN. FPDCSNMCHEPTSVGLAASIG
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Template Sequence  GKYRVATWEEALDHIAKKMLEIREKYGPEAIAFFGHG. . . TGDYWFVDFLPAAWGSPNAAKPSVSLCTAPREVASQWVFG
Template Known Secondary structure 




GGGS
S...TTTTTTT



TTTSS
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   110.........120.........130.........140...... ...150.........160.........170.........180......
 
   196...200.........210.........220... ......230.........240.........250.........260.........270....
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Query Sequence  VGKGTVLLEDFEKCDLVICIGHNPGTNH. PRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASA
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Template Sequence  RPIGGHEPIDWENARYIVLIGHHIGEDTHNTQLQDFALALKNGAKVVVVDPRFS. . . . . . . . . . . . . . . . . . TAAAKAHR
Template Known Secondary structure  S


SS

B
GGG
SS

BTTB

TT

SB

..................TTGGG
S
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   187..190.........200.........210.........220.........230.........240 ........
 
   275....280.........290.........300.........310.........320.........330.........340.........350....
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Query Sequence  YYNVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIERISGLSQTQIAELADA
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Template Sequence  WLPIKPGTDTALLLAWIHVLIYED. . . . . . . . . . LYDKEYVAKYTVGFEELKAHVKDFTPEWAEKHTEIPAQVIREVARE
Template Known Secondary structure 


TT
TT..........
S

TTTTTT


S
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   249250.........260.........270.. .......280.........290.........300.........310........
 
   355....360 .........370.........380.........390.........400.........410.........420...
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Query Sequence  YAAAER. TIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKPSAE. . . . . . . . . .
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Template Sequence  MAAHKPRAVLPPTRHNVWYGDDTYRVMALLYVNVLLGNYGRPGGFYIAQSPYLEKYPLPPLPLEPAAGGCSGPSGGDHEP
Template Known Secondary structure  TTTS



S


STT
TT
BTSTTSB


B











S




S

SS
STTTTSS
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   319320.........330.........340.........350.........360.........370.........380.........390........
 
   424.....430.........440.........450.........460.........470.........480.........490.........500..
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Query Sequence  . FLARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTAR
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Template Sequence  EGFKPRADKGKFFARSTAIQELIEPMITGEPYPIKGLFAYGINLFHSIPNVPRTKEALKNLDLYVAIDVLPQEHVMWA. .
Template Known Secondary structure  SSSS

TTTTSSSSSS

GGGTTS

SS



S

SS

S

SS

TS..
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   399400.........410.........420.........430.........440.........450.........460.........470......
 
   503......510.........520.........530.........540.........550.........560.........570.........580..
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Query Sequence  HSYILPVLGRSEIDMQKNGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQSVVAWEYLVEDYDRIRN
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Template Sequence  . DVILPEATYLERYDDFV. . . . . LVAHKTPFIQLRTPAHEPL. FDTKPGWWIARELGLRLGLEQYFPWKTIEEYLETRLQ
Template Known Secondary structure  .S
B

GGG

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BSS


SS


.SS
B
TTT
TTT


S
T
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   477..480.........490... ......500.........510.. .......520.........530.........540.........
 
   583......590.........600.........610 .........620...... ...630.........640.........650..
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Query Sequence  DIEAVLPEFADYNQRIRHPGGFHLINAA. AERRWMTPSGKANFIT. . . . . . . . . SKGLLEDPSSAFNSKLVMATVRSHDQ
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Template Sequence  SLGLDLETMKGMGTLVQRGKPWLEDWEKEGRLPFGTASGKIELYCQRFKEAGHQPLPVFTPPEEPPEGFYRLLYGRSPVH
Template Known Secondary structure  TTT

S





STTT


SSSSSSS

SSSS

S










TT



B

TT
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   550.........560.........570.........580.........590.........600.........610.........620.........
 
   653......660.........670.........680.........690......... 700.........710.........720......
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Query Sequence  YNTTIYGMDDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTP. . DGKRSSRRMDRLKVVIYPMADRSLVTY. . . .
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Template Sequence  TFART. . QNNWVLMEMDPENEVWIHKEEAKRLGLKEGDYVMLVNQDGVKEGPVRVKPTARIRKDCVYIVHGFGHKAPLMR
Template Known Secondary structure 
GGGG..TT


S


TT

TT
TTS


SSB
TTB
B
BTT




TTST
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   630.... .....640.........650.........660.........670.........680.........690.........700.......
 
   727..730.........740.........750........
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Query Sequence  . . . . . FPESNHMLTLDNHDPLSGIPGYKSIPVELEPS
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Template Sequence  LAHGRGASDNYLQTRYKLDPISGGAGLRVNFVRLEKA
Template Known Secondary structure  TTTT
S






SSS


TT
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   708.710.........720.........730.........740....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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