Job Description P77561 Confidence 92.82% Date Thu Jan 5 12:30:35 GMT 2012 Rank 81 Aligned Residues 174 % Identity 18% Template c2decA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:325aa long hypothetical protein; PDBTitle: crystal structure of the ph0510 protein from pyrococcus horikoshii ot3 Resolution 1.70 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	Q	Q	A	F	D	E	I	G	A	R	L	Q	S	Y	S	D	P	N	Q	V	E	F	Y	T	S	G	R	T	S	N	E	A	A	F	L	Y	Q	L	F	A	R	E	Y	G	S	N	N	F	P	D	C	S	N	M	C	H	E	P	T	S	V	G	L	A	A	S	I	G	V	G	K	G	T	V	L	L	E	D
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	I	K	A	D	K	V	F	N	K	V	K	D	K	I	S	L	P	N	R	I	L	Y	L	G	C	G	S	S	H	F	L	S	K	L	L	A	M	V	T	N	M	H	G	G	L	G	I	A	L	P	C	S	E	F	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	E	T	Y
Template Known Secondary structure														T	T	T					S							S	T																T	T	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70																		.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																								.																																								.	.
Query SS confidence																																								.																																								.	.
Query Sequence		F	E	K	C	D	L	V	I	C	I	G	H	N	P	G	T	N	H	P	R	M	L	T	S	L	R	A	L	V	K	R	G	A	K	M	I	A	I	.	N	P	L	Q	E	R	G	L	E	R	F	T	A	P	Q	N	P	F	E	M	L	T	N	S	E	T	Q	L	A	S	A	Y	Y	N	V	R	I	G	G	.	.
Query Conservation																																								.																																								.	.
Alig confidence																				.	.	.	.																	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																				.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	G	E	V	E	L	A	V	G	I	S	R	S	G	E	T	T	.	.	.	.	E	I	L	L	A	L	E	K	I	N	V	K	K	L	G	I	T	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	S	L	T	R	M	C	D	Y	S	L	V	V	P	A	I	E	E	S
Template Known Secondary structure					S		S							S	S	S				.	.	.	.								T			S							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						S	S											S
Template Predicted Secondary structure																				.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
											283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	D	M	A	L	L	K	G	M	M	R	L	L	I	E	R	D	D	A	A	S	A	A	G	R	P	S	L	L	D	D	E	F	I	Q	T	H	T	V	G	F	D	E	L	R	R	D	V	L	N	S	E	W	K	D	I	E	R	I	S	G	L	S	Q	T	Q	I	A	E	L	A	D
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	M	T	H	S	F	T	S	F	Y	F	A	Y	L	Q	L	L	R	Y	S	Y	G	L	P	P	L	N	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	S	K	A	T	E	K	S	L	E	Y	E	R	Y	I	R	E	I	V	E
Template Known Secondary structure		S	S																				T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																														.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	A	A	A	E	R	T	I	I	C	Y	G	M	G	I	T
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		S	F	.	.	D	F	Q	N	I	I	F	L	G	S	G	L	L
Template Known Secondary structure				.	.			S								T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		184	.			.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions