Return to main results Retrieve Phyre Job Id

Job DescriptionP77561
Confidence79.09%DateThu Jan 5 12:30:35 GMT 2012
Rank102Aligned Residues108
% Identity13%Templatec1powA_
PDB info PDB header:oxidoreductase(oxygen as acceptor)Chain: A: PDB Molecule:pyruvate oxidase; PDBTitle: the refined structures of a stabilized mutant and of wild-type2 pyruvate oxidase from lactobacillus plantarum
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.........190.. .......200......
Predicted Secondary structure 



















.







Query SS confidence 
































































.













Query Sequence  QQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSNMCHEPTSVGLAA. SIGVGKGTVLLEDF
Query Conservation 



  

 


 
          

    
   
   
    

 
       
      
   .  
         
 
Alig confidence 
















....











































.













Template Conservation     
      
  
 

....


 
 
   
   
  


 

 

  
   

     

   
  
          
Template Sequence  VQAVTRLTQTLLAAERP. . . . LIYYGIGARKAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSANRVAQKPANEAL
Template Known Secondary structure  T
SS....
GGGGGGT


GGGTTSS
TT
TTB



SSS

Template Predicted Secondary structure 


....






























Template SS confidence 















































































   199200.........210..... ....220.........230.........240.........250.........260.........270....
 
   207..210.........220.........230.........240.....
Predicted Secondary structure 










Query SS confidence 






































Query Sequence  EKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKMIAINP
Query Conservation    

 

  
 

    
     
  
  









Alig confidence 














......

















Template Conservation    

 

 

     ......             
 

 
Template Sequence  AQADVVLFVGNNYPF. . . . . . AEVSKAFKNTRYFLQIDI
Template Known Secondary structure 
SS


TT......TTTTT
S
S
Template Predicted Secondary structure 







......





Template SS confidence 






































   275....280......... 290.........300.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions