 |
Job Description | P77561 | Confidence | 79.09% | Date | Thu Jan 5 12:30:35 GMT 2012 |
Rank | 102 | Aligned Residues | 108 |
% Identity | 13% | Template | c1powA_ |
PDB info |
PDB header:oxidoreductase(oxygen as acceptor) | Chain: A: PDB Molecule:pyruvate oxidase; |
PDBTitle: the refined structures of a stabilized mutant and of wild-type2 pyruvate oxidase from lactobacillus plantarum
|
Resolution | 2.50 Å |
|
 |
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
. | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | A | F | D | E | I | G | A | R | L | Q | S | Y | S | D | P | N | Q | V | E | F | Y | T | S | G | R | T | S | N | E | A | A | F | L | Y | Q | L | F | A | R | E | Y | G | S | N | N | F | P | D | C | S | N | M | C | H | E | P | T | S | V | G | L | A | A | . |
S | I | G | V | G | K | G | T | V | L | L | E | D | F |
Query Conservation |   |
|
|
|
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   | . |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
| . | . | . | . |
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
V | Q | A | V | T | R | L | T | Q | T | L | L | A | A | E | R | P | . |
. |
. |
. |
L | I | Y | Y | G | I | G | A | R | K | A | G | K | E | L | E | Q | L | S | K | T | L | K | I | P | L | M | S | T | Y | P | A | K | G | I | V | A | D | R | Y | P | A | Y | L | G | S | A | N | R | V | A | Q | K | P | A | N | E | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |  | . | . | . | . |  |  |  |  |
| G | G | G | G | G | G |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
| G | G | G | T | T | S | S |
| T | T |
| T | T | B |
|
|
|
| S | S | S |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
|
|
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
  |
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | C | D | L | V | I | C | I | G | H | N | P | G | T | N | H | P | R | M | L | T | S | L | R | A | L | V | K | R | G | A | K | M | I | A | I | N | P |
Query Conservation |   |
  |   |
|
|   |
|
|   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|   |
|
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
Template Sequence |   |
A | Q | A | D | V | V | L | F | V | G | N | N | Y | P | F | . |
. |
. |
. |
. |
. |
A | E | V | S | K | A | F | K | N | T | R | Y | F | L | Q | I | D | I |
Template Known Secondary structure |   |
 |  |
| S |  |  |  |  |  | S |
|
|
| T | T | . | . | . | . | . | . |  |  |  |  | T | T | T | T | T |
| S |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
275 | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|