Job Description P77561 Confidence 100.00% Date Thu Jan 5 12:30:35 GMT 2012 Rank 12 Aligned Residues 656 % Identity 18% Template c1eu1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dimethyl sulfoxide reductase; PDBTitle: the crystal structure of rhodobacter sphaeroides dimethylsulfoxide2 reductase reveals two distinct molybdenum coordination environments. Resolution 1.30 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																										.	.	.																															.	.	.	.	.	.	.
Query SS confidence																																										.	.	.																															.	.	.	.	.	.	.
Query Sequence		G	F	D	C	P	G	C	A	W	P	D	P	K	H	S	A	S	F	D	I	C	E	N	G	A	K	A	I	A	W	E	V	T	D	K	Q	V	N	A	S	.	.	.	F	F	A	E	N	T	V	Q	S	L	L	T	W	G	D	H	E	L	E	A	A	G	R	L	T	Q	P	L	K	Y	.	.	.	.	.	.	.
Query Conservation																																										.	.	.																															.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.												.	.	.	.																.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Sequence		G	E	V	M	S	G	C	H	W	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	F	K	A	R	V	E	N	G	R	A	V	A	F	E	P	W	D	K	D	P	A	P	S	H	Q	L	P	G	V	L	.	.	.	.	D	S	I	Y	S	P	T	R	I	K	Y	P	M	V	R	R	E	F	L	E	K	G
Template Known Secondary structure									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T									T	T		S	S			T	T						.	.	.	.		T	T	T	S	T	T	B			S											G
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.														.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
								116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.	.	.	.	.																											.	.	.																			.	.	.	.
Query SS confidence		.	.	.	.	.	.																											.	.	.																			.	.	.	.
Query Sequence		.	.	.	.	.	.	D	A	V	S	D	C	Y	K	P	L	S	W	Q	Q	A	F	D	E	I	G	A	R	L	Q	S	Y	.	.	.	S	D	P	N	Q	V	E	F	Y	T	S	G	R	T	S	N	E	A	.	.	.	.	A	F	L	Y	Q	L	F	A	R	E	Y	G	S	N	N	F	P	D	C	S	N	M	C
Query Conservation		.	.	.	.	.	.																											.	.	.																			.	.	.	.
Alig confidence		.	.	.	.	.	.																											.	.	.																			.	.	.	.													.
Template Conservation																																																																							.
Template Sequence		V	N	A	D	R	S	T	R	G	N	G	D	F	V	R	V	T	W	D	E	A	L	D	L	V	A	R	E	L	K	R	V	Q	E	S	Y	G	P	T	G	T	F	G	G	S	Y	G	W	K	S	P	G	R	L	H	N	C	Q	V	L	M	R	R	A	L	N	L	A	G	.	G	F	V	N	S	S	G	D	Y	S
Template Known Secondary structure		G	G	S		G	G	G	T	T	S	S																											G	G	G													S	S															T	.			B				S		S	S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.								.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																.	.	.	.																														.	.	.	.	.	.	.
Query SS confidence																.	.	.	.																														.	.	.	.	.	.	.
Query Sequence		H	E	P	T	S	V	G	L	A	A	S	I	G	V	.	.	.	.	G	K	G	T	V	L	L	E	D	F	E	K	C	D	L	V	I	C	I	G	H	N	P	G	T	N	H	P	R	.	.	.	.	.	.	.	M	L	T	S	L	R	A	L	V	K	R	G	A	K	M	I	A	I	N	P	L	Q	E	R	G	L
Query Conservation																.	.	.	.																														.	.	.	.	.	.	.
Alig confidence																.	.	.	.																														.	.	.	.	.	.	.																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		T	A	A	A	Q	I	I	M	P	H	V	M	G	T	L	E	V	Y	E	Q	Q	T	A	W	P	V	V	V	E	N	T	D	L	M	V	F	W	A	A	D	P	M	K	T	N	E	I	G	W	V	I	P	D	H	G	A	Y	A	G	M	K	A	L	K	E	K	G	T	R	V	I	I	N	P	V	R	T	.	.	.
Template Known Secondary structure		S	T	T									T	S	S			T	T	S			S										S						S							T	T			S	S	B																T							S	B			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		E	R	F	T	A	P	Q	N	P	F	E	M	L	T	N	S	E	T	Q	L	.	A	S	A	Y	Y	N	V	R	I	G	G	D	M	A	L	L	K	G	M	M	R	L	L	I	E	R	D	D	A	A	S	A	A	G	R	P	S	L	L	D	D	E	F	I	Q	T	H	T	V	G	F	D	E	L	R	R	D	V	L
Query Conservation																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.																												.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	A	D	Y	F	G	A	D	V	V	S	P	R	P	Q	T	D	V	A	L	M	L	G	M	A	H	T	L	Y	S	E	D	.	.	.	.	.	.	.	.	.	.	L	H	D	K	D	F	L	E	N	C	T	T	G	F	D	L	F	A	A	Y	L	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T								T	T																T	T	.	.	.	.	.	.	.	.	.	.		S																				T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.											.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		331							.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		N	.	.	.	.	.	.	S	E	W	K	D	I	E	R	I	S	G	L	S	Q	T	Q	I	A	E	L	A	D	A	Y	A	A	A	E	R	T	I	I	C	Y	G	M	G	I	T	Q	H	E	H	G	T	Q	N	V	Q	Q	L	V	N	L	L	L	M	K	G	N	I	G	K	P	G	A	G	I	C	P	L	R	G
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																													.
Template Conservation																																					.
Template Sequence		G	E	S	D	G	T	P	K	T	A	E	W	A	A	E	I	C	G	L	P	A	E	Q	I	R	E	L	A	R	S	F	V	A	G	R	.	T	M	L	A	A	G	W	S	I	Q	R	M	H	H	G	E	Q	A	H	W	M	L	V	T	L	A	S	M	I	G	Q	I	G	L	P	G	G	G	F	G	L	S	Y	H
Template Known Secondary structure		T	T	T	T	S														S														S	S		.							S	G	G	G	S	S	T	T	T															T		T	T	S	T	T					S		T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.					.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		H	S	N	V	Q	G	D	R	T	V	G	I	.	.	.	.	T	E	K	P	S	A	E	F	L	A	R	L	G	E	R	Y	G	F	T	P	P	H	A	P	G	H	A	A	I	A	S	M	Q	A	I	C	T	G	Q	A	R	A	L	I	C	M	G	G	N	F	A	L	A	M	P	D	R	E	A	S	A	V	P	L
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		Y	S	N	G	G	S	P	T	S	D	G	P	A	L	G	G	I	S	D	G	G	E	G	G	A	T	S	I	P	C	A	R	V	V	D	M	L	L	N	P	G	G	E	F	Q	F	N	G	A	T	A	T	Y	P	D	V	K	L	A	Y	W	A	G	G	N	P	F	A	H	H	Q	D	R	N	R	M	L	K	A	W
Template Known Secondary structure		S	T	T	T	T	S				S																S				G	G	G								T	T						T	T															S							S	S									G
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	L	D	L	A	V	H	V	A	T	K	L	N	R	S	H	L	L	T	A	R	H	S	Y	I	L	P	V	L	G	R	S	E	I	D	M	Q	K	N	G	A	Q	A	V	T	V	E	D	S	M	S	M	I	H	A	S	R	G	V	L	K	P	A	G	V	M	L	K	S	E	C	A	V	V	A	G	I	A	Q
Query Conservation
Alig confidence																						.	.	.																					.	.	.	.	.																	.
Template Conservation																						.	.	.																					.	.	.	.	.																	.
Template Sequence		E	K	L	E	T	F	I	V	Q	D	F	Q	W	T	A	T	A	R	H	A	.	.	.	D	I	V	L	P	A	T	T	S	Y	E	R	N	D	I	E	S	V	G	D	.	.	.	.	.	Y	S	N	R	A	I	L	A	M	K	K	V	V	D	P	L	.	Y	E	A	R	S	D	Y	D	I	F	A	A	L	A	E
Template Known Secondary structure		G	G		S							S	B							T		.	.	.	S					B			G	G	G	S								T	.	.	.	.	.	T	T											S				.	T	T		B
Template Predicted Secondary structure																						.	.	.																					.	.	.	.	.																	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.				470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.						490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.		.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		561	.	.	.	.	.	.	.	.	570	.						.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.															.	.	.	.	.	.	620	.
Predicted Secondary structure													.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	L	P	Q	S	V	V	A	W	E	.	.	.	.	.	Y	L	V	E	D	Y	D	R	I	R	N	D	I	E	A	V	L	P	E	F	A	D	Y	N	Q	R	I	R	H	P	G	G	F	H	L	I	N	A	A	A	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	M	T	P	S	G	K
Query Conservation													.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																										.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		R	L	G	K	G	A	E	F	T	E	G	R	D	E	M	G	W	I	S	S	F	Y	E	A	A	V	K	Q	A	E	F	K	N	V	A	M	P	S	F	E	D	.	F	W	S	E	G	I	V	E	F	P	I	T	E	G	A	N	F	V	R	Y	A	D	F	R	E	D	P	L	F	N	P	L	G	T	P	S	G	L
Template Known Secondary structure			T	T							T	T																					T	T									.												S	G	G	G	G			T	T							T	T	T	S			S	S	T	T	S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.		.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
		622	.	.	.	.																		.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	F	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	G	L	L	E	D	P	S	S	A	F	N	S	K	L	V	M	A	T	V	R	S	H	D	Q	Y	N	T	T	I	Y	G	M	D	D	R	Y	R	G	V	F	G	Q	R	D	V	V	F	M	S	A	K	Q	A	K	I	C
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	I	Y	S	K	N	I	E	K	M	G	Y	D	D	C	P	A	H	P	T	W	M	E	P	A	E	R	L	G	G	A	G	A	K	Y	P	L	H	V	V	A	S	H	P	K	S	R	L	H	S	Q	L	N	G	T	S	L	R	D	L	Y	A	V	A	G	H	E	P	C	L	I	N	P	A	D	A	A	A	R
Template Known Secondary structure				S	S										T	T	S		S	S							S	S		T	T		T	T			S	S									S	S	S	B	T	T	B	T	T	T	S	G	G	G	G	G	T		B	T	T	B												T	T
Template Predicted Secondary structure
Template SS confidence
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
		685	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.												.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	K	N	G	E	R	V	N	L	I	A	L	T	P	D	G	K	R	S	S	R	R	M	D	R	L	K	V	V	I	Y	P	M	A	D	R	S	L	V	T	.	.	.	.	.	.	.	.	.	.	.	Y	F	P	E	S	N	H	M	L	T	L	D	N	H	D	P	L	S	G	I	P	G	Y	K	S	I	P	V
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	A	D	G	D	V	L	R	V	F	N	D	R	G	Q	I	L	V	G	A	K	V	S	D	A	V	M	P	G	A	I	Q	I	Y	E	G	G	W	Y	D	P	L	D	P	S	E	E	G	T	L	D	K	Y	G	D	V	N	V	L	S	L	D	V	G	T	S	K	L	A	Q	G	N	C	G	Q	T	I	L	A
Template Known Secondary structure		T			T	T								S	S											T	T	B		T	T						T	T					B	S		T	T	S	T	T			B	S	S			G	G	G	S						S		T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
		754	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	E	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	E	K	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		760	.	.	.	.