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Job DescriptionP46133
Confidence33.79%DateThu Jan 5 12:04:06 GMT 2012
Rank1Aligned Residues139
% Identity12%Templatec3qnqD_
PDB info PDB header:membrane protein, transport proteinChain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system
Resolution3.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130.........140.........150... ......160.........170.........180....
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Query Sequence  VGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIMPPMGA. . LIFLAVGRHPVAGLLAAIAGVGCGFTANLLI
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Template Sequence  SGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSG
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   298.300.........310.........320.........330.........340.........350.........360.........370.......
 
   185....190.........200.........210.........220.........230.........240........
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Query Sequence  VTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMASSVVVLTIVGGLITDKIIEPRLGQWQGNSD
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Template Sequence  AAVTWTTPIL. . . FSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEAAAEN
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   378.380....... ..390.........400.........410.........420.........430........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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