Return to main results Retrieve Phyre Job Id

Job DescriptionP46133
Confidence8.91%DateThu Jan 5 12:04:06 GMT 2012
Rank9Aligned Residues11
% Identity64%Templatec3h0gK_
PDB info PDB header:transcriptionChain: K: PDB Molecule:dna-directed rna polymerase ii subunit rpb11; PDBTitle: rna polymerase ii from schizosaccharomyces pombe
Resolution3.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........
Predicted Secondary structure 




Query SS confidence 










Query Sequence  VERIGNKVPHP
Query Conservation   
  




  
Alig confidence 










Template Conservation 
 



 



Template Sequence  VLFAGYKVPHP
Template Known Secondary structure 
S
B

B
S
T
Template Predicted Secondary structure 


Template SS confidence 










   55....60.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions