Return to main results Retrieve Phyre Job Id

Job DescriptionP46133
Confidence3.69%DateThu Jan 5 12:04:06 GMT 2012
Rank55Aligned Residues31
% Identity13%Templatec1afoB_
PDB info PDB header:integral membrane proteinChain: B: PDB Molecule:glycophorin a; PDBTitle: dimeric transmembrane domain of human glycophorin a, nmr,2 20 structures
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110.........120
Predicted Secondary structure 

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Query Sequence  PLGAILALVLGAGLAERVGLLPALMVKMASH
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Template Sequence  PEITLIIFGVMAGVIGTILLISYGIRRLIKK
Template Known Secondary structure  S


Template Predicted Secondary structure 
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   71........80.........90.........100.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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