Return to main results Retrieve Phyre Job Id

Job DescriptionP09377
Confidence61.76%DateThu Jan 5 11:02:16 GMT 2012
Rank464Aligned Residues65
% Identity26%Templated1s3ja_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.. .......220.........230.........240.........250.........260
Predicted Secondary structure 





.......











Query SS confidence 























. . . . . . .















































Query Sequence  NWDAVADQFSLSLRTLHRQLKQQT. . . . . . . GLTPQRYLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRR
Query Conservation 

  

     
   
 
 

   .......
 
    
   

  
  

     

 


   

   
 


 

 
Alig confidence 























.......















......













.










Template Conservation 
 
 
   
   
                  


  
   
  
   ......   
  


  
 
.    

  
  
Template Sequence  SADQLXSDIQLSLQALFQKIQPEXLESXEKQGVTPAQLFVLASLKKH. . . . . . GSLKVSEIAERXEV. KPSAVTLXADR
Template Known Secondary structure 
TT

......STS.
Template Predicted Secondary structure 





......





.
Template SS confidence 














































































   3......10.........20.........30.........40......... 50.........60... ......70....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions