Return to main results Retrieve Phyre Job Id

Job DescriptionP09377
Confidence79.04%DateThu Jan 5 11:02:16 GMT 2012
Rank322Aligned Residues40
% Identity18%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171........180...... ...190......... 200.........210
Predicted Secondary structure 


...





.
Query SS confidence 















. . .












.










Query Sequence  SRLNLLLAWLEDHFAD. . . EVNWDAVADQFSL. SLRTLHRQLKQ
Query Conservation           
      ...  

  

     .
   
 
 

 
Alig confidence 















...












.










Template Conservation   

  

 

       
  





    
  
  

  

  
Template Sequence  ARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKA
Template Known Secondary structure  SS


TT
SS
Template Predicted Secondary structure 










Template SS confidence 











































   6...10.........20.........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions