Job Description P09377 Confidence 61.36% Date Thu Jan 5 11:02:16 GMT 2012 Rank 467 Aligned Residues 156 % Identity 13% Template c3kccA_ PDB info PDB header:transcription Chain: A: PDB Molecule:catabolite gene activator; PDBTitle: crystal structure of d138l mutant of catabolite gene activator protein Resolution 1.66 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																	.	.	.	.															.
Query SS confidence																	.	.	.	.															.
Query Sequence		I	H	V	F	N	G	Q	P	Y	T	I	T	G	G	T	.	.	.	.	V	C	F	V	R	D	H	D	R	H	L	Y	E	H	.	T	D	N	L	C	L	T	N	V	L	Y	R	S	P	D	R	F	Q	F	L	A	G	L	N	Q	L	L	P	Q	E	L	D	G	Q	Y	P	S	H	W	R	V	N	H	S	V	L
Query Conservation																	.	.	.	.															.
Alig confidence																	.	.	.	.															.
Template Conservation
Template Sequence		I	H	K	Y	P	S	K	S	T	L	I	H	Q	G	E	K	A	E	T	L	Y	Y	I	V	K	G	S	V	A	V	L	I	K	D	E	E	G	K	E	M	I	L	S	Y	L	N	Q	G	D	F	I	G	E	L	G	L	F	E	E	G	Q	E	R	S	A	W	V	R	A	K	T	A	C	E	V	A	E	I	S	Y
Template Known Secondary structure							T	T						T	T		B																			T	T											T	T				S		T	T	T	T	S	T	T		B			S					S	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.										.	.	.	190	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	V	R	Q	L	V	A	Q	M	E	Q	Q	E	G	E	N	D	L	P	S	T	A	S	R	E	I	L	F	M	Q	L	L	L	L	L	R	K	S	S	L	Q	E	N	L	E	N	S	A	S	R	L	N	L	L	L	A	W	L	E	D	H	F	A	D	.	.	.	.	.	.	.	.	.	E	V	N	W	D	A
Query Conservation																																																																			.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.
Template Sequence		K	K	F	R	Q	L	I	Q	V	N	P	D	I	L	M	R	L	S	A	Q	M	A	R	R	L	Q	V	T	S	E	K	V	G	N	L	A	F	.	.	.	.	.	.	.	.	L	L	V	T	G	R	I	A	Q	T	L	L	N	L	A	K	Q	P	D	A	M	T	H	P	D	G	M	Q	I	K	I	T	R	Q	E
Template Known Secondary structure												T																											.	.	.	.	.	.	.	.																T	S	T	T					T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	Q	F	S	L	S	L	R	T	L	H	R	Q	L	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	Q	I	V	G	C	S	R	E	T	V	G	R	I	L	K	M
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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