 |
Job Description | P09377 | Confidence | 94.00% | Date | Thu Jan 5 11:02:16 GMT 2012 |
Rank | 111 | Aligned Residues | 83 |
% Identity | 12% | Template | c3eqeB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:putative cystein deoxygenase; |
PDBTitle: crystal structure of the yubc protein from bacillus2 subtilis. northeast structural genomics consortium target3 sr112.
|
Resolution | 2.82 Å |
|
 |
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
| . |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | F | P | S | G | N | A | S | V | A | I | E | P | R | L | P | Q | A | D | F | P | E | H | H | H | . |
D | F | H | E | I | V | I | V | E | H | G | T | G | I | H | V | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
N | G | Q | P | Y | T | I | T | G | G | T | V | C | F | V | R | D | H | D | R | H | L | Y | E | H | T | D | N |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|   |
|
|   |
|   |
|
|
|   |
|   |
|
|
|
|   |   |
|   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |
Template Sequence |   |
I | Y | R | N | N | E | L | E | I | I | V | I | N | I | P | P | N | K | E | T | T | V | H | D | H | G | Q | S | I | G | C | A | X | V | L | E | G | K | L | L | N | S | I | Y | R | S | T | G | E | H | A | E | L | S | N | S | Y | F | V | H | E | G | E | C | L | I | S | T | K | G | L | I | H | K | X | S | N | P | T | S |
Template Known Secondary structure |   |
 |  |  |
| S | S |
|  |  |  |  |  |  |  |
| T | T |
| B |
|
|  |  |  |
| T | T |
|  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |
|
| S | S | S |
|
|
|
| S |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T | T |
|  |  |  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | C | L | T | N | V | L | Y | R | S | P | D | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
E | R | X | V | S | L | H | V | Y | S | P | P | L |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  | S |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|