Job Description P09377 Confidence 77.46% Date Thu Jan 5 11:02:16 GMT 2012 Rank 337 Aligned Residues 157 % Identity 11% Template c1zybA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcription regulator, crp family; PDBTitle: crystal structure of transcription regulator from bacteroides2 thetaiotaomicron vpi-5482 at 2.15 a resolution Resolution 2.15 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		I	H	V	F	N	G	Q	P	Y	T	I	T	G	G	T	.	.	.	.	V	C	F	V	R	D	H	D	R	H	L	Y	E	H	T	D	N	L	C	L	T	N	V	L	Y	R	S	P	D	R	F	Q	F	L	A	G	L	N	Q	L	L	P	Q	E	L	D	G	Q	Y	P	S	H	W	R	V	N	H	S	V	L	Q
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																																																							.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		F	I	K	H	K	A	G	E	T	I	I	K	S	G	N	P	C	T	Q	L	C	F	L	L	K	G	E	I	S	I	V	T	N	A	K	E	N	I	Y	T	V	I	E	Q	I	E	A	P	Y	L	I	E	P	Q	S	L	F	G	X	N	T	N	Y	A	S	S	Y	V	A	H	T	E	V	.	.	.	.	.	.	.
Template Known Secondary structure							T	T						T	T	S	B										S									G	G	G	S									S	S					G	G	G	G	S	S	S			B		S	S					S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		Q	V	R	Q	L	V	A	Q	M	E	Q	Q	E	G	E	N	D	L	P	S	T	A	S	R	E	I	L	F	M	Q	L	L	L	L	L	R	K	S	S	L	Q	E	N	L	E	N	S	A	S	R	L	N	L	L	L	A	W	L	E	D	H	F	A	D	E	.	.	.	.	V	N	W	D	A	V	A	D	Q	F	S
Query Conservation																																																																			.	.	.	.
Alig confidence																																																																			.	.	.	.
Template Conservation
Template Sequence		H	T	V	C	I	S	K	A	F	V	L	S	D	L	F	R	Y	D	I	F	R	L	N	Y	X	N	I	V	S	N	R	A	Q	N	L	Y	S	R	L	W	D	E	P	T	L	D	L	K	S	K	I	I	R	F	F	L	S	H	C	E	K	P	Q	G	E	K	T	F	K	V	K	X	D	D	L	A	R	C	L	D
Template Known Secondary structure														T	G	G	G	S																						T	T	S					S											T	T		S	S	S	S	S																T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L	R	T	L	H	R	Q	L	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	R	L	N	I	S	K	T	L	N	E
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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