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Job Description | P0A887 | Confidence | 23.88% | Date | Thu Jan 5 11:07:11 GMT 2012 |
Rank | 393 | Aligned Residues | 111 |
% Identity | 17% | Template | c3qq5A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:small gtp-binding protein; |
PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
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Resolution | 2.99 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
V | R | R | G | Q | T | V | L | . |
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S | M | L | K | M | G | R | E | K | L | R | N | I | G | V | I | G | N | V | E | Y | V | Q | A | N | A | E | A | L | P | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | D | G | G | D | L | V | I | L | V | V | P | I | D | L | G | A | P | K | G | R | L | I | M | P | Q | V | H | A | I | R | E | A | L | D | R | E | A | I | A | L | V | V | K | E | R | E | L | R | Y | V | M | E | N | I | G | M | K | P | K | L | V | I | T | D | S | Q | V | A | M | K | V | A | S | D | V | P | E | D | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
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130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
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160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | D | N | T | F | D | C | I | T | I | S | F | G | L | R | N | V | T | D | K | D | K | A | L | R | S | M | Y | R | V | . |
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L | K | P | G | G | R | L | L | V | L | E | F | S | K | P | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | L | T | T | F | S | I | V | E | S | R | Y | R | . |
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Template Known Secondary structure |   |
S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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262 | . | . | . | . | . | . | . | 270 | . | . | . | . | |
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. | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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