Job Description P0A887 Confidence 99.74% Date Thu Jan 5 11:07:11 GMT 2012 Rank 70 Aligned Residues 197 % Identity 14% Template c3p9kD_ PDB info PDB header:transferase Chain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde Resolution 2.25 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																				.	.																.
Query SS confidence																				.	.																.
Query Sequence		V	F	H	S	V	A	S	K	Y	D	V	M	N	D	L	M	S	F	.	.	G	I	H	R	L	W	K	R	F	T	I	D	C	S	G	.	V	R	R	G	Q	T	V	L	D	L	A	G	G	T	G	D	L	T	A	K	F	S	R	L	V	G	E	T	G	K	V	V	L	A	D	I	N	E	S	M	L	K	M	G
Query Conservation																				.	.																.
Alig confidence																				.	.																.																										.
Template Conservation																																																															.
Template Sequence		A	F	E	Y	H	G	T	D	P	R	F	N	R	V	F	N	E	G	M	K	N	H	S	I	I	I	T	K	K	L	L	E	L	Y	H	G	F	E	G	L	G	T	L	V	D	V	G	G	G	V	G	A	T	V	A	A	I	A	A	H	Y	.	P	T	I	K	G	V	N	F	D	L	P	H	V	I	S	E	A	P
Template Known Secondary structure							T	T																													T	T	T	T		S						T		T	T	S											.	T	T													T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		R	E	K	L	R	N	I	G	V	I	G	N	V	E	Y	V	Q	A	N	A	E	A	L	P	F	P	D	N	T	F	D	C	I	T	I	S	F	G	L	R	N	V	T	D	K	D	.	.	K	A	L	R	S	M	Y	R	V	L	K	P	G	G	R	L	L	V	L	E	F	S	K	P	I	I	E	P	L	S	K	A
Query Conservation																																																.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	F	P	G	V	T	H	V	G	G	D	M	F	K	.	.	.	.	.	.	.	.	.	.	.	E	V	P	S	G	D	T	I	L	M	K	W	I	L	H	D	W	S	D	Q	H	C	A	T	L	L	K	N	C	Y	D	A	L	P	A	H	G	K	V	V	L	V	Q	C	I	L	P	V	N	P	E	A	N	P	S
Template Known Secondary structure				T	T						S		T	T	T	.	.	.	.	.	.	.	.	.	.	.						S						S		G	G	G	B																S		T	T										B		S	S			S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.												.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	A	Y	S	F	H	V	L	P	R	I	G	S	L	V	A	N	D	A	D	S	Y	R	Y	L	A	E	S	I	R	M	H	P	D	Q	D	T	L	K	A	M	M	Q	D	A	G	F	E	S	V	D	Y	Y	N	L	T	A	G	V	V	A	L	H	R	G	Y	K
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		S	Q	G	V	F	H	V	D	M	I	M	L	A	H	N	P	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	R	Y	E	R	E	F	Q	A	L	A	R	G	A	G	F	T	G	V	K	S	T	Y	I	Y	A	N	A	.	W	A	I	E	F	T	K
Template Known Secondary structure																S	S	B		.	.	.	.	.	.	.	.	.	.	.	.	.				B												T											T	T		.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.														.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions