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Job DescriptionP0A887
Confidence99.58%DateThu Jan 5 11:07:11 GMT 2012
Rank128Aligned Residues145
% Identity19%Templatec3p2kA_
PDB info PDB header:transferaseChain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.........100.... .....110.........120........
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Query Sequence  RFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMG. . . . REKLRNIGVIGNVEYVQANAEALP
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Template Sequence  KDELTEIIGQFDRVHIDLGTGDGRNIYKLAIND. QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF
Template Known Secondary structure  TSST
TTS
.TT
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GGGGTS
GGGT

SS


TTS

G
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   14.....20.........30.........40...... ...50.........60.........70.........80.........90..
 
   129130......... 140.........150. ........160.........170.........180.........190.........200...
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Query Sequence  FPDNTFDCITI. . . . SFGLRNVTDKDK. ALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDAD
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Template Sequence  ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGTT
S

TT
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   93......100.........110.........120.........130.........140..
 
   204.....210.........220.........230........
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Query Sequence  SYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNL
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Template Sequence  . . . . . . . . . . AYFLSEQYKAELSNSGFRIDDVKEL
Template Known Secondary structure  ..........STTT
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   161........170.........180.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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