Job Description P0A887 Confidence 99.87% Date Thu Jan 5 11:07:11 GMT 2012 Rank 14 Aligned Residues 209 % Identity 15% Template c3ocjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis Resolution 1.39 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	V	M	N	D	L	M	S	F	G	I	H	R	L	W	K	R	F	T	I	D	C	S	G	V	R	R	G	Q	T	V	L	D	L	A	G	G	T	G	D	L	T	A	K	F	S	R	L	V	G	E	T	G	K	V	V	L	A	D	I	N	E	S	M	L	K	M	G	R	E	K	L	R	N	I	G	V	I	G
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		Y	E	R	L	P	A	V	L	A	T	R	E	R	H	G	H	F	R	R	A	L	Q	R	H	.	L	R	P	G	C	V	V	A	S	V	P	C	G	W	X	S	E	L	L	A	L	D	Y	S	A	C	P	G	V	Q	L	V	G	I	D	Y	D	P	E	A	L	D	G	A	T	R	L	A	A	G	H	A	L	A	G
Template Known Secondary structure																										.			T	T						T	T		T	T						T	S			T	T		T	T								S													T	T	S	T	T	G	G
Template Predicted Secondary structure																										.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		N	V	E	Y	V	Q	A	N	A	E	A	L	P	F	P	D	N	T	F	D	C	I	T	I	S	F	G	L	R	N	V	T	D	K	D	K	.	.	.	A	L	R	S	M	Y	R	V	L	K	P	G	G	R	L	L	V	L	E	F	S	K	P	I	I	E	P	L	S	K	A	Y	D	A	Y	S	F	H	V	L	P
Query Conservation																																						.	.	.
Alig confidence																			.																			.	.	.																																		.	.	.	.
Template Conservation																			.																																																							.	.	.	.
Template Sequence		Q	I	T	L	H	R	Q	D	A	W	K	L	D	T	R	E	G	.	Y	D	L	L	T	S	N	G	L	N	I	Y	E	P	D	D	A	R	V	T	E	L	Y	R	R	F	W	Q	A	L	K	P	G	G	A	L	V	T	S	F	L	T	P	P	P	A	L	S	P	D	S	P	W	D	.	.	.	.	X	Q	A	I
Template Known Secondary structure		G								G	G	G					S		.								S	S	G	G	G																																	T	T	T		T	T					.	.	.	.	G	G	G	S
Template Predicted Secondary structure																			.																																																							.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	G	S	L	V	A	N	D	A	D	S	Y	R	Y	L	A	E	S	I	R	M	H	P	D	Q	D	T	L	K	A	M	M	Q	D	A	G	F	E	S	V	D	Y	Y	N	L	T	A	G	V	V	A	L	H	R	G	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	H	D	L	Q	L	Q	Q	L	V	F	T	R	L	I	Q	P	R	W	N	A	L	R	T	H	A	Q	T	R	A	Q	L	E	E	A	G	F	T	D	L	R	F	E	D	D	R	A	R	L	F	P	T	V	I	A	R	K
Template Known Secondary structure																T	T			S																	T	T										T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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