Job Description P0A887 Confidence 99.91% Date Thu Jan 5 11:07:11 GMT 2012 Rank 3 Aligned Residues 200 % Identity 17% Template c3bkxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of cyclopropane-fatty-acyl-phospholipid synthase-2 like protein (yp_807781.1) from lactobacillus casei atcc 334 at 1.853 a resolution Resolution 1.85 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	Y	D	V	M	N	D	L	M	S	F	G	I	H	R	L	W	K	.	.	.	.	.	.	.	.	.	.	R	F	T	I	D	C	S	G	V	R	R	G	Q	T	V	L	D	L	A	G	G	T	G	D	L	T	A	K	F	S	R	L	V	G	E	T	G	K	V	V	L	A	D	I	N	E	S	M	L	K	M
Query Conservation																					.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	L	D	Y	I	T	D	L	X	A	L	G	P	T	A	N	A	R	T	I	Q	R	R	Q	T	A	H	R	L	A	I	A	E	A	W	Q	V	K	P	G	E	K	I	L	E	I	G	C	G	Q	G	D	L	S	A	V	L	A	D	Q	V	G	S	S	G	H	V	T	G	I	D	I	A	S	P	D	Y	G	A
Template Known Secondary structure		G	G							T	S				S	S	T	T																				T			T	T							S		T	T	S												T	T								S	S		T	T			S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		104	.	.	.	.	.										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		G	R	E	K	L	R	.	.	.	.	.	.	.	.	.	N	I	G	V	I	G	N	V	E	Y	V	Q	A	N	A	E	A	L	P	F	P	D	N	T	F	D	C	I	T	I	S	F	G	L	R	N	V	T	D	K	D	K	A	L	R	S	M	Y	R	V	L	K	P	G	G	R	L	L	V	L	E	F	S	K	P
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	T	L	G	Q	A	W	N	H	L	L	A	G	P	L	G	D	R	L	T	V	H	F	N	T	N	L	S	D	D	L	G	P	I	A	D	Q	H	F	D	R	V	V	L	A	H	S	L	W	Y	F	A	S	A	N	A	L	A	L	L	F	K	N	X	A	A	V	C	D	H	V	D	V	A	E	W	S	X	Q
Template Known Secondary structure		S	S												S	T	T	G	G	G					S	S			T	T	T			G	G	G	T	T				S						S		G	G	G	S	S													T	T	T		S									S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	E	P	L	S	K	A	Y	D	A	Y	S	F	H	V	L	P	R	I	G	S	L	V	A	N	D	A	D	S	Y	R	Y	L	A	E	S	I	R	M	H	P	D	Q	D	T	L	K	A	M	M	Q	D	A	G	F	E	S	V	D	Y	Y	N	L	T	A	G
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.
Template Sequence		P	T	A	L	D	Q	I	G	H	L	Q	A	A	X	I	Q	G	L	L	Y	A	I	A	P	S	D	V	A	N	I	R	.	.	.	.	.	.	.	.	T	L	I	T	P	D	T	L	A	Q	I	A	H	D	N	T	W	T	Y	T	A	G	T	I	V	E	D	P
Template Known Secondary structure			S	S	G	G	G																	S			S	S					.	.	.	.	.	.	.	.	S														T	T									B			T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.									.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions