Job Description P0A887 Confidence 73.70% Date Thu Jan 5 11:07:11 GMT 2012 Rank 352 Aligned Residues 190 % Identity 10% Template c2zwaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine carboxyl methyltransferase 2; PDBTitle: crystal structure of trna wybutosine synthesizing enzyme2 tyw4 Resolution 1.70 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.								.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																						.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.
Query Sequence		R	L	W	K	R	F	T	I	D	C	S	G	V	R	R	G	Q	T	V	L	D	L	A	G	G	T	G	D	L	T	A	K	F	S	R	L	.	.	.	.	.	.	.	V	G	E	T	G	K	V	V	L	A	D	I	N	E	S	M	L	K	M	G	R	E	K	L	R	N	I	G	V	I	G	N	V	E	Y	V	Q
Query Conservation																																						.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	R	L	N	S	I	I	E	Q	T	P	Q	D	K	K	I	V	V	V	N	L	G	C	G	Y	D	P	L	P	F	Q	L	L	D	T	N	N	I	Q	S	Q	Q	Y	H	D	R	V	S	F	I	D	I	D	Y	S	D	L	L	K	I	K	I	E	L	I	K	T	I	P	E	L	S	K	I	I	G	L	S	E
Template Known Secondary structure												S		T	T	S								T		T	T										T	T		G	G	G	G	G	G	S	S	S																													T	T			S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																								.	.					.																													.	.	.	.	.	.	.
Query SS confidence																																								.	.					.																													.	.	.	.	.	.	.
Query Sequence		A	N	A	E	A	L	P	F	P	D	N	T	F	D	C	I	T	I	S	F	G	L	R	N	V	T	D	K	D	K	A	L	R	S	M	Y	R	V	.	.	L	K	P	G	.	G	R	L	L	V	L	E	F	S	K	P	I	I	E	P	L	S	K	A	Y	D	A	Y	S	F	H	V	L	.	.	.	.	.	.	.
Query Conservation																																								.	.					.																													.	.	.	.	.	.	.
Alig confidence																																								.	.					.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	D	Y	V	D	D	S	N	V	D	F	L	T	T	P	K	Y	L	A	R	P	C	D	L	N	D	S	K	M	F	S	T	L	L	N	E	C	Q	L	Y	D	P	N	V	V	K	V	F	V	A	E	V	S	L	A	Y	M	K	P	E	R	S	D	S	I	I	E	A	T	S	K	M	E	N	S	H	F	I	I
Template Known Secondary structure		S		S	S		S		T	T							S	S								T	T												T	T	T	T		T	T									S	S	G	G	G	S														T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
												192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	P	R	I	G	S	L	V	A	N	D	A	D	S	Y	R	Y	L	A	E	S	I	R	M	H	P	D	Q	D	T	L	K	A	M	M	Q	D	A	G	F	E	S	V	D	Y	Y	N	L
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	Q	L	I	P	K	G	P	F	E	P	F	S	K	Q	M	L	A	H	F	K	R	N	D	S	P	L	Q	S	V	L	K	Y	N	T	I	E	S	Q	V	Q	R	F	N	K	L	G	F	A	Y	V	N	V	G	D	M
Template Known Secondary structure							T	T		T	T	S													T	T					G	G	G	T			S											T	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions