Job Description P0A887 Confidence 97.44% Date Thu Jan 5 11:07:11 GMT 2012 Rank 297 Aligned Residues 136 % Identity 12% Template c2px2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1) Resolution 2.00 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		R	F	T	I	D	C	S	G	V	R	R	G	Q	T	V	L	D	L	A	G	G	T	G	D	L	T	A	K	F	S	R	L	V	G	E	T	G	K	V	V	L	A	D	I	N	E	S	M	L	K	M	.	.	G	R	E	K	L	R	N	I	G	V	I	G	N	V	E	Y	V	Q	A	N	A	E	A	L	P	F	P
Query Conservation																																																					.	.
Alig confidence																																				.																	.	.
Template Conservation																																				.
Template Sequence		R	W	L	V	E	R	R	F	V	Q	P	I	G	K	V	V	D	L	G	C	G	R	G	G	W	S	Y	Y	A	A	T	M	K	N	.	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	M	L	M	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	K	P	S	E	I	S	D
Template Known Secondary structure							T	T	S											T		T	T	S							T	T	S	T	T	.											S	T	T	S								S	T	T	G	G	G						S			G	G	G	S						S
Template Predicted Secondary structure																																				.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.														.
Query SS confidence																						.														.
Query Sequence		D	N	T	F	D	C	I	T	I	S	F	G	L	R	N	V	T	D	K	D	.	K	A	L	R	S	M	Y	R	V	L	K	P	G	.	G	R	L	L	V	L	E	F	S	K	P	I	I	E	P	L	S	K	A	Y	D	A	Y	S	F	H
Query Conservation																						.														.
Alig confidence																						.														.
Template Conservation
Template Sequence		T	L	L	C	D	I	G	E	S	S	P	S	A	E	I	E	E	Q	R	T	L	R	I	L	E	M	V	S	D	W	L	S	R	G	P	K	E	F	C	I	K	I	L	C	P	Y	M	P	K	V	I	E	K	L	E	S	L	Q	R	R	F
Template Known Secondary structure												S																					T	T			S							S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions