Job Description P45758 Confidence 99.97% Date Thu Jan 5 12:03:35 GMT 2012 Rank 2 Aligned Residues 156 % Identity 43% Template c3ossD_ PDB info PDB header:protein transport Chain: D: PDB Molecule:type 2 secretion system, secretin gspd; PDBTitle: the crystal structure of enterotoxigenic escherichia coli gspc-gspd2 complex from the type ii secretion system Resolution 2.63 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	G	A	N	F	N	N	A	D	I	R	Q	F	V	E	I	V	G	Q	H	L	G	K	T	I	L	I	D	P	S	V	Q	G	T	I	S	V	R	S	N	D	T	F	S	Q	Q	E	Y	Y	Q	F	F	L	S	I	L	D	L	Y	G	Y	S	V	I	T	L	D	N	G	F	L	K	V	V	R	S	A	N	V
Query Conservation
Alig confidence																																																																											.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		T	F	T	A	N	F	K	D	T	D	L	K	S	F	I	E	T	V	G	A	N	L	N	K	T	I	I	M	G	P	G	V	Q	G	K	V	S	I	R	T	M	T	P	L	N	E	R	Q	Y	Y	Q	L	F	L	N	L	L	E	A	Q	G	Y	A	V	V	P	M	Y	I	D	T	N	N	.	.	.	.	.	D	G
Template Known Secondary structure																								T							S											S	S																			T										T	T	S	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	S	P	G	M	I	A	D	S	S	R	P	G	V	G	D	E	L	V	T	R	I	V	P	L	E	N	V	P	A	R	D	L	A	P	L	L	R	Q	M	M	D	A	G	S	V	G	N	V	V	H	Y	E	P	S	N	V	L	I	L	T	G	R	A	S	T	I	N	K	L	I	E	V	I	K	R	V	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	E	G	D	E	L	V	L	K	V	V	K	S	A	G	D	E	M	V	T	K	V	V	P	V	R	N	V	S	V	R	E	L	A	P	I	L	R	Q	M	I	D	S	A	G	S	G	N	V	V	N	Y	D	P	S	N	V	I	M	L	T	G	R	A	S	V	V	E	R	L	T	E	V	I	Q	R	V	D	H
Template Known Secondary structure					G	G	G										T	T										S	S	S		G	G	G	G													T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		707	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
		187
Predicted Secondary structure
Query SS confidence
Query Sequence		I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		165

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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