Job Description P45758 Confidence 1.92% Date Thu Jan 5 12:03:35 GMT 2012 Rank 93 Aligned Residues 46 % Identity 15% Template c3h7hA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt4; PDBTitle: crystal structure of the human transcription elongation factor dsif,2 hspt4/hspt5 (176-273) Resolution 1.55 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	Q	H	L	G	K	T	I	L	I	D	P	S	V	Q	G	T	I	S	V	R	S	N	D	T	F	S	Q	Q	E	Y	Y	Q	F	F	L	S	I	L	D	L	Y	G	Y	S	V	I	T	L	D	N	G	F
Query Conservation
Alig confidence										.	.	.	.																				.	.	.	.	.
Template Conservation										.	.	.	.																				.	.	.	.	.
Template Sequence		W	V	S	K	W	Q	R	V	.	.	.	.	S	N	F	K	P	G	V	Y	A	V	S	V	T	G	R	L	P	Q	G	.	.	.	.	.	I	V	R	E	L	K	S	R	G	V	A	Y	K	S	R	D	T	A	I
Template Known Secondary structure							T	T		.	.	.	.	T	T	S		S															.	.	.	.	.								T	T
Template Predicted Secondary structure										.	.	.	.																				.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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