Return to main results Retrieve Phyre Job Id

Job DescriptionP45758
Confidence13.22%DateThu Jan 5 12:03:35 GMT 2012
Rank19Aligned Residues85
% Identity14%Templatec3adyA_
PDB info PDB header:proton transportChain: A: PDB Molecule:dotd; PDBTitle: crystal structure of dotd from legionella
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50..... ....60.........70.........80.........90
Predicted Secondary structure 

















...









Query SS confidence 









































. . .


































Query Sequence  ALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILID. . . PSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV
Query Conservation           
  
  

 
  
 
  

  

   
 


 
...
 


 


     
        
  

   

  
Alig confidence 









.









.



















...












.




















Template Conservation      
    
.   

 

 
.
 



  


  

 
 
 
 


 
  
 
  
 .     


 

 

  

 
 
Template Sequence  TLTIPNAYNL. QARASVDWSG. PIEELTARIAKAAHFRFRVLGKSPSVPVLISISTKD. ESLAEILRDIDYQAGKKASIH
Template Known Secondary structure  TTTS


GGG.G
.TT
S


SS

.GGG
Template Predicted Secondary structure 







.
.












.




Template SS confidence 















































































   70......... 80......... 90.........100.........110.........120..... ....130.........140......
 
   91........100.
Predicted Secondary structure 

Query SS confidence 










Query Sequence  ITLDNGFLKVV
Query Conservation     
     
 
Alig confidence 










Template Conservation 
 
    


 
Template Sequence  VYPNSQVVELR
Template Known Secondary structure  TTTT
Template Predicted Secondary structure 




Template SS confidence 










   147..150.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions