Job Description P0AGB6 Confidence 98.99% Date Thu Jan 5 11:28:41 GMT 2012 Rank 17 Aligned Residues 90 % Identity 13% Template d1smyf2 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 2.70

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	D	A	I	E	A	E	N	F	E	S	G	G	A	L	K	E	I	S	N	P	E	N	L	M	L	S	E	E	L	R	Q	I	V	F	R	T	I	E	S	L	P	E	D	L	R	M	A	I	T	L	R	E	L	D	G	L	S	Y	E	E	I	A	A	I	M	D	C	P	V	G	T	V	R	S	R	I	F	R
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		P	I	G	D	E	K	D	S	F	Y	G	D	F	I	P	D	E	H	L	P	S	P	V	D	A	A	T	Q	S	L	L	S	E	E	L	E	K	A	L	S	K	L	S	E	R	E	A	M	V	L	K	L	R	K	G	.	L	I	D	G	E	E	V	G	A	F	F	G	V	T	R	E	R	I	R	Q	I	E	N	K
Template Known Secondary structure		B		T	T	T	S	S		B	G	G	G	G	S			S	S	S			T																		T	T	S														.	T	T					T	T	T	S	S	S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	E	A	I	D	N	K	V	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	R	K	L	K	Y	H	E	S	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions