Job Description P0AGB6 Confidence 98.59% Date Thu Jan 5 11:28:41 GMT 2012 Rank 22 Aligned Residues 74 % Identity 15% Template d1rp3a3 SCOP info Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																													.	.
Query SS confidence																											.	.	.	.																													.	.
Query Sequence		K	G	D	Q	K	A	F	N	L	L	V	V	R	Y	Q	H	K	V	A	S	L	V	S	R	Y	.	.	.	.	V	P	S	G	D	V	P	D	V	V	Q	E	A	F	I	K	A	Y	R	A	L	D	S	F	R	G	D	S	.	.	A	F	Y	T	W	L	Y	R	I	A	V	N	T	A	K	N	Y	L	V	A	Q
Query Conservation																											.	.	.	.																													.	.
Alig confidence																											.	.	.	.																													.	.
Template Conservation
Template Sequence		Y	S	N	Q	I	E	R	E	E	L	I	L	K	Y	L	P	L	V	K	A	I	A	T	N	I	K	K	H	L	P	E	D	V	D	I	R	D	L	I	S	Y	G	V	I	G	L	I	K	A	V	D	N	L	S	T	E	N	P	K	R	A	E	A	Y	I	K	L	R	I	K	G	A	I	Y	D	Y	L	R	S	L
Template Known Secondary structure																												T	T	S		T	T	S																			T						T																					T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions