Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGB6
Confidence97.42%DateThu Jan 5 11:28:41 GMT 2012
Rank41Aligned Residues44
% Identity20%Templated1p4wa_
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160.........170.........180.
Predicted Secondary structure 









Query SS confidence 












































Query Sequence  SLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAI
Query Conservation   
         
    
 
  


  



   
   
 


  
Alig confidence 













.





























Template Conservation   

 

  

  
 . 
 
   

  
 

  

      
  

Template Sequence  RLSPKESEVLRLFA. EGFLVTEIAKKLNRSIKTISSQKKSAMMKL
Template Known Secondary structure  S

.T

TS
Template Predicted Secondary structure 


.







Template SS confidence 












































   150.........160... ......170.........180.........190...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions