 |
Job Description | P0AGB6 | Confidence | 76.21% | Date | Thu Jan 5 11:28:41 GMT 2012 |
Rank | 294 | Aligned Residues | 49 |
% Identity | 20% | Template | c3cdlA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:transcriptional regulator aefr; |
PDBTitle: crystal structure of a tetr family transcriptional regulator from2 pseudomonas syringae pv. tomato str. dc3000
|
Resolution | 2.36 Å |
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | M | A | I | T | L | R | E | L | D | G | L | S | Y | E | E | I | A | A | I | M | D | C | P | V | G | T | V | R | S | R | I | F | R | A | R | E | A | I | D | N | K | V | Q | P | L | I | R | R |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |
|   |   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | A | E | F | G | D | R | G | F | E | I | T | S | X | D | R | I | A | A | R | A | E | V | S | K | R | T | V | Y | N | H | F | P | S | K | E | E | L | F | A | E | X | L | Q | R | L | W | N | C |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|