Return to main results Retrieve Phyre Job Id

Job DescriptionP77721
Confidence97.92%DateThu Jan 5 12:32:05 GMT 2012
Rank38Aligned Residues58
% Identity10%Templated2hs5a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain GntR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10...... ...20.........30.........40.........50.........60...
Predicted Secondary structure  .........















Query SS confidence 










. . . . . . . . .














































Query Sequence  RIQAIKQMVAN. . . . . . . . . DKKVTVSNLSGIFQVTEETIRRDLEKLEDEGFLTRTYGGAVLNTAML
Query Conservation 
   

  
  .........   
 
 


  
 

  





  

  
 
 
  


       
Alig confidence 










.........














































Template Conservation      
   
   
  
    
  
    

    


 


 

  
   
 
      
  
  

Template Sequence  RTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPT
Template Known Secondary structure  TSS
TT

T

TTSTTT



Template Predicted Secondary structure 
























Template SS confidence 


































































   27..30.........40.........50.........60.........70.........80.........90...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions