 |
Job Description | P77721 | Confidence | 79.09% | Date | Thu Jan 5 12:32:05 GMT 2012 |
Rank | 460 | Aligned Residues | 50 |
% Identity | 18% | Template | d1q1ha_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Transcription factor E/IIe-alpha, N-terminal domain
|
Resolution | 2.90 |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | A | K | D | R | I | Q | A | I | K | Q | M | V | A | N | D | K | K | V | T | V | S | N | L | S | G | I | F | Q | V | T | E | E | T | I | R | R | D | L | E | K | L | E | D | E | G | F | L | T |
Query Conservation |   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|
|   |   |
|
|   |
Template Sequence |   |
L | L | G | D | D | V | I | D | V | L | R | I | L | L | D | K | G | T | E | M | T | D | E | E | I | A | N | Q | L | N | I | K | V | N | D | V | R | K | K | L | N | L | L | E | E | Q | G | F | V | S |
Template Known Secondary structure |   |
T | S |
| S | T | T |  |  |  |  |  |  |  |  |  |  |
| S |
| B |
|  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |
Template Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|