|   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | S | F | Y | E | E | K | Q | L | I | A | R | K | A | L | P | F | I | D | N | K | T | T | M | A | A | D | S | S | S | T | V | M | E | L | L | K | L | L | Q | D | R | S | G | . |
. |
L | T | L | L | T | N | S | A | E | A | I | H | V | L | A | Q | S | E | I | K | V | V | S | T | G | G | E | L | N | K | N | T | L | S |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   | . | . |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
N | N | Q | D | E | L | K | K | L | A | A | T | E | A | A | K | S | I | T | T | E | I | T | L | G | V | G | T | G | S | T | V | G | F | L | I | E | E | L | V | N | Y | R | D | K | I | K | T | V | V | S | S | S | E | D | S | T | R | K | L | K | A | L | G | F | D | V | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  | G | G | G | S | G | G | G |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
| . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | G | R | I | T | K | E | I | I | R | R | Y | H | V | D | I | M | V | M | S | C | K | G | L | D | I | N | S | G | A | L | D | S | N | E | A | E | A | E | I | K | K | T | M | I | R | Q | A | T | E | V | A | L | L | V | D | H | S | K | F |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
D | L | N | Y | A | G | E | I | D | L | Y | I | D | G | A | D | E | C | N | N | H | K | E | L | I | K | G | G | G | A | A | L | T | R | E | K | I | C | V | A | A | A | K | K | F | I | C | I | I | D | E | S | K | K |
Template Known Secondary structure |   |
. | . | . | . | . | . | . |
|  |  |  |  |
| S |  |  |  |  |  |  |
|
| S |  |  |
| T | T | S |
|  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  | G | G | G | B |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |