Job Description P77721 Confidence 96.22% Date Thu Jan 5 12:32:05 GMT 2012 Rank 167 Aligned Residues 141 % Identity 16% Template c3kv1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri Resolution 1.70 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		F	Y	E	E	K	Q	L	I	A	R	K	A	L	P	F	.	.	.	.	I	D	N	K	T	T	M	A	A	D	S	S	S	T	V	M	E	L	L	K	L	L	Q	D	R	S	G	L	T	L	L	T	N	S	A	E	A	I	H	V	L	A	Q	S	E	I	K	V	V	S	T	G	G	E	L	N	K	N	T	L	S
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		T	N	E	Q	R	K	Q	V	A	A	L	V	S	S	Y	L	N	N	N	L	Q	E	G	X	A	V	A	V	G	Q	G	Q	N	V	A	A	V	A	D	H	A	G	I	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	N	A	R	F	V	S	A	I	G	G	T	H	I	I	N	.	.
Template Known Secondary structure																							T	T								S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	B		B						.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		L	Q	G	R	I	T	K	E	I	I	R	R	Y	H	V	D	I	M	V	M	S	C	K	G	L	D	I	N	S	G	A	L	D	S	N	E	A	E	A	E	I	K	K	.	.	T	M	I	R	Q	A	T	E	V	A	L	L	V	D	H	S	K	F	D	R	K	A	F	V	Q	L	A	D	F	S	H	I	N	Y	I
Query Conservation																																													.	.
Alig confidence		.																																											.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	A	D	H	I	C	R	R	L	A	K	K	Y	G	G	S	S	E	T	L	Y	A	P	A	Y	V	N	D	P	S	L	R	S	A	F	X	E	H	A	T	I	K	E	T	L	S	Q	A	R	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	A	L	V	G	I	G	D	X	D	E	N	S	H	X
Template Known Secondary structure		.													T								S	B	S	B		S	S									T	S												T		.	.	.	.	.	.	.	.	.	.	.	.	.	S													T
Template Predicted Secondary structure		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.														.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		I	T	D	K	S	P	G	A	E	W	I	.	A	F	C	K	D	N	N	I
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		V	K	L	G	F	F	T	P	K	E	F	V	E	A	R	L	N	D	G	I
Template Known Secondary structure				T	T	S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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